Gene detail

Detailed information of ANN01339-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:23764210...23769947
NR annotation: XP_020621128.1, uncharacterized protein LOC110058809 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9EQD0	Frizzled-5 OS=Mus musculus OX=10090 GN=Fzd5 PE=1 SV=3
Q8CHL0	Frizzled-5 OS=Rattus norvegicus OX=10116 GN=Fzd5 PE=2 SV=1
Q13467	Frizzled-5 OS=Homo sapiens OX=9606 GN=FZD5 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01392	Fz	Fz domain	Domain	Interproscan
PF00431	CUB	CUB domain	Domain	Interproscan
PF00057	Ldl_recept_a	Low-density lipoprotein receptor domain class A	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036790	Homologous_superfamily	Frizzled cysteine-rich domain superfamily	Interproscan
IPR002172	Repeat	Low-density lipoprotein (LDL) receptor class A repeat	Interproscan
IPR050841	Family	Developmental metalloproteases and endocytic receptors	Interproscan
IPR035914	Homologous_superfamily	Spermadhesin, CUB domain superfamily	Interproscan
IPR036055	Homologous_superfamily	LDL receptor-like superfamily	Interproscan
IPR020067	Domain	Frizzled domain	Interproscan
IPR000859	Domain	CUB domain	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR001791	Domain	Laminin G domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24251	OVOCHYMASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan