Detailed information of ANN01353-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:24113988...24118078
NR annotation: CAH3022323.1, unnamed protein product [Porites evermanni]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96EQ9Histone-lysine N-methyltransferase PRDM9 OS=Mus musculus OX=10090 GN=Prdm9 PE=1 SV=2
P0C6Y7Histone-lysine N-methyltransferase PRDM9 OS=Rattus norvegicus OX=10116 GN=Prdm9 PE=3 SV=1
Q9NQV7Histone-lysine N-methyltransferase PRDM9 OS=Homo sapiens OX=9606 GN=PRDM9 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000194 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21549
all species →		PRDM2_PRPR domain zinc finger protein 2, PR domainDomainInterproscan
PF00096
all species →		zf-C2H2Zinc finger, C2H2 typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087
all species →		DomainZinc finger C2H2-typeInterproscan
IPR046341
all species →		Homologous_superfamilySET domain superfamilyInterproscan
IPR050752
all species →		FamilyC2H2-type zinc-finger domain-containing proteinInterproscan
IPR036236
all species →		Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR001214
all species →		DomainSET domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24384
all species →		FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN01353-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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