Detailed information of ANN01355-RA in Nanomia septata

Genomic Location: chr1:85137675...85140073
NR annotation: XP_047138041.1, protein lin-9 homolog [Hydra vulgaris]
Species Nanomia septata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5RHQ8Protein lin-9 homolog OS=Danio rerio OX=7955 GN=lin9 PE=3 SV=1
Q8C735Protein lin-9 homolog OS=Mus musculus OX=10090 GN=Lin9 PE=1 SV=2
Q5TKA1Protein lin-9 homolog OS=Homo sapiens OX=9606 GN=LIN9 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005745 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19438
all species →
LIN9_CLIN9 C-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010561
all species →
FamilyProtein LIN-9/Protein ALWAYS EARLYInterproscan
IPR045831
all species →
DomainLIN-9, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21689
all species →
LIN-9Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000003
all species →
Biological Processobsolete reproductionInterproscan
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0005654
all species →
Cellular ComponentnucleoplasmInterproscan
GO:0006351
all species →
Biological ProcessDNA-templated transcriptionInterproscan
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0017053
all species →
Cellular Componenttranscription repressor complexInterproscan
GO:0051726
all species →
Biological Processregulation of cell cycleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN01355-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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