Detailed information of ANN01578-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:28846894...28862746
NR annotation: PFX32631.1, PiggyBac transposable element-derived protein 1 [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q96DM1PiggyBac transposable element-derived protein 4 OS=Homo sapiens OX=9606 GN=PGBD4 PE=1 SV=3
Q5M786WD repeat-containing protein 5 OS=Xenopus tropicalis OX=8364 GN=wdr5 PE=2 SV=1
Q86VZ2WD repeat-containing protein 5B OS=Homo sapiens OX=9606 GN=WDR5B PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13842Tnp_zf-ribbon_2DDE_Tnp_1-like zinc-ribbonDomainInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032718DomainPiggyBac transposable element-derived protein 4, C-terminal zinc-ribbonInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46599PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05236COPA, RET1; coatomer subunit alpha-Exosomeko04147deepkoala

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