Detailed information of ANN01776-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:33544438...33555171
NR annotation: CAH3171602.1, unnamed protein product [Porites lobata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q28DX0Queuine tRNA-ribosyltransferase accessory subunit 2 OS=Xenopus tropicalis OX=8364 GN=qtrt2 PE=2 SV=1
Q6DF96Queuine tRNA-ribosyltransferase accessory subunit 2 OS=Xenopus laevis OX=8355 GN=qtrt2 PE=2 SV=1
Q5ZM96Queuine tRNA-ribosyltransferase accessory subunit 2 OS=Gallus gallus OX=9031 GN=QTRT2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006042 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01702
all species →		TGTQueuine tRNA-ribosyltransferaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036511
all species →		Homologous_superfamilyQueuine tRNA-ribosyltransferase-likeInterproscan
IPR002616
all species →		DomaintRNA-guanine(15) transglycosylase-likeInterproscan
IPR050852
all species →		FamilyQueuine tRNA-ribosyltransferaseInterproscan
IPR028592
all species →		FamilyQueuine tRNA-ribosyltransferase accessory subunit QTRTD1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46064
all species →		QUEUINE TRNA-RIBOSYLTRANSFERASE ACCESSORY SUBUNIT 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006400
all species →		Biological ProcesstRNA modificationInterproscan
GO:0016763
all species →		Molecular Functionpentosyltransferase activityInterproscan
GO:0101030
all species →		Biological ProcesstRNA-guanine transglycosylationInterproscan
GO:0008479
all species →		Molecular FunctiontRNA-guanosine(34) queuine transglycosylase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K15407QTRT2, QTRTD1; queuine tRNA-ribosyltransferase accessory subunit-Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP