Gene detail

Detailed information of ANN01915-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:35459098...35462632
NR annotation: XP_015758654.1, PREDICTED: grpE protein homolog 1, mitochondrial-like [Acropora digitifera]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9HAV7	GrpE protein homolog 1, mitochondrial OS=Homo sapiens OX=9606 GN=GRPEL1 PE=1 SV=2
Q5RA81	GrpE protein homolog 1, mitochondrial OS=Pongo abelii OX=9601 GN=GRPEL1 PE=2 SV=1
Q99LP6	GrpE protein homolog 1, mitochondrial OS=Mus musculus OX=10090 GN=Grpel1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008441 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01025 all species →	GrpE	GrpE	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000740 all species →	Family	GrpE nucleotide exchange factor	Interproscan
IPR013805 all species →	Homologous_superfamily	GrpE nucleotide exchange factor, coiled-coil	Interproscan
IPR009012 all species →	Homologous_superfamily	GrpE nucleotide exchange factor, head	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21237 all species →	GRPE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000774 all species →	Molecular Function	adenyl-nucleotide exchange factor activity	Interproscan
GO:0001405 all species →	Cellular Component	PAM complex, Tim23 associated import motor	Interproscan
GO:0006457 all species →	Biological Process	protein folding	Interproscan
GO:0030150 all species →	Biological Process	protein import into mitochondrial matrix	Interproscan
GO:0042803 all species →	Molecular Function	protein homodimerization activity	Interproscan
GO:0051082 all species →	Molecular Function	unfolded protein binding	Interproscan
GO:0051087 all species →	Molecular Function	protein-folding chaperone binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03687	GRPE; molecular chaperone GrpE	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.