Gene detail

Detailed information of ANN01918-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:35477448...35520449
NR annotation: CAH3041179.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN01918-RA

ATGTCTTCGGTGAAGGTAGCTGTAAGAGTCAGGCCGTTCGCTAGCCGCGAAAATAACCGACGATGCAAATGCATAATTGGGATGCATGGAGCAACTACGACTATCCTGAACCCAAGACACCTGGGTGAAAAGCCTAAGAGTTTCACCTTTGATTATTCTTATTGGTCCCACAATGAGGATGACCCCCATTTTGCATCACAGAAAAAAGTTTATGCAGATATTGGTAAAGAAATGTTGGCGCATGCATTTGAGGGGTACAACATCTGTATCTTTGCATATGGCCAAACAGGGTCTGGAAAGTCGTATACCATGATGGGGAAACAGGAGGCCGACCAGAAAGGAATTATACCTCAGCTTTGTGAAGAGCTGTTTGAAAGGATTGATGGAACCAGCAGTGAGGAGATGACATTATCAGCTGAGGTCAGCTATCTTGAGATCTACTGTGAAAGAGTGAGAGATTTACTGAGTCCAAGTGCCAAGAACAACCTAAGGGTCAGGGAGCACCCCATGTTAGGTCCATATGTAGAGGATCTGACCAAACTTGCCGTCACTTCTTTTGCTGATATAAATGACCTTATTGATGAAGGCAATAAAGCCAGGACAGTGGCTGCCACAAACATGAATGAAACCAGTAGTAGATCACATGCAATTTTTAGCATTGTGTTCACTCAACGGAGGCATGATTCCCTATCTGATCTTTCATCAGCTAAGGTCAGCAAGTTGAGTTTGGTGGACCTTGCTGGTAGTGAGAGGGCAGATGCAACTGGGGCGAAGGGGGAGAGACTTAAGGAAGGTGCAAACATCAACAAGTCATTGACAACTCTGGGAAAGGTGATATCTGCTCTGGCTGAACAGTCTTCTCATAAGAAAAGAAGGAGATCAGATTTTGTACCGTACAGGGATTCTGTGCTGACATGGCTCCTGAAAGAAAATCTAGGTGGCAACTCAAAGACAGCCATGATTGCCGCCATAAGTCCAGCAGACATCAACTTTGAAGAAACTCTGAGCACACTAAGATATGCTGATCGGGCGAAGCAGATAGTGTGCAAAGCAATTGTCAATGAAGATCCAAATGCAAAGATTATTAGAGAGTTAAAGGAGGAAGTGTCAAAACTAAAGGAGCTGCTTGTCAAGGAAGGTTACAATCCTGATGATCTCCAATCTGTGTTGAAACAAGGCTCCACTCATTTGCCTAGAAGATACAGCCAAGATTTCCAAGATGGCACCCTAGAGAGGCTTAAGGTGTCAGAAAAGCTTATAGCAGAGCTTAATGAAACTTGGGAAGAGAAGCTGAGAAAAACAGAAGCCATTAAACAGGAGAGAGAGGCGATGCTAGCTGAAATGGGTGTGGCCATTGGTGTGGATGGTCACACAGTTGGACTCTTTCAACCAAGAAGGAAACCTCATTTAGTAAATTTAAATGAAGACCCTTTGATGTCTGAATGCCTTCTTTACTATGTCAAGGATGGGATTACAAGGGTTGGACAAGCGGGAGCAAAAAGCCACCAAGACATACAGCTGAGTGGGGAAAACATTCTGGATGAACACTGTGTCTTGGAACACACGCCAGGCGTGGTTAAAATAGTACCTTGCGAGAACAGCCGTACATTTGTGAATGGAAAGCTGGTCACAGAATCCACGGTGTTAAGATCAGGTTCTCGCATAATTCTGGGAAACAATCATGTGTTCAGATTTAATTTTCCAGATCAAGCTCGTGAGGAGAGAATTCGCCAGTCACGAGGAAATCTTCTTGAAGATATAAATGGAAAAAGCGATGCGAAGGGCGAAGAGCCTGTGGACTGGTCATTCGCTGTGTTGGAGCTGTTAAGAGAACAGGGATGGGACGTAAAAGAAATGAACGACAGGGTTGTAGAACTAGAGGAACAAATCAAGAAAGAAAAGGGTCAAGCAGATTTGCTTTTGGAACAACAAAGACTGTCCTATGAAACCAGACTGCAGGAACTGCAGCGGCAGATGGACCTTGCGTCAGTTCCATCCAGTGAATCAGTGGACAGTGACATTGATGTGGAAAGTTTTGACAGTGAGAGTCCGCTGACCGAGCGTGAGCTGAACTTGGCTGAATTGGTGGTGGACAAGTGGAAGTGTTACCAGTGCACCTCGCTAAGGGATGACTTATTGAGTCACGCAGTGCTGTTGAAGGAAGCAAATGCAATCAGCGTGGAGCTAAGGAAGAAGGTGGAGTTCCAATTCACACAGTTGACAGACACACTCTACACTCCCCTCCCGTCATTCCTTCTGAGCGAAGTCAAACACAAAGACCATCCCACTGTACTTGCTGTTGAGGTGAAGGACATGAAGAATGGCGCCTCGCATTATTGGTCCCTCGCCAAATTAAGGGATCGACTTGAGGACATGCGCTTCATGTATGACACAGCAGCGGAGTCCACCAGTAACATTTCTTTCGACTCTGTTGATCCTTTTTACGATTCACTGCCTTGGTTCAGACTGATTGGAAGATCATTTGTATACCTCAGTAACTTGGTTTATGGTGTTCCTCTGGAGCAAACTGTCCCGATTGTTAGTGAATCAGGAGACATACAAGGTGATCTGGCTATCAGCATCCAACAATGCACAGATGATCACACCTGGGGAGTGGATGAAATGGGTCGGTCTTCCGTGCTTTGGCTGGATTTTCGATCTGATAATCGTGAAAAAAAGACCGATGTCGAGGAGGCGGAAGAAGCCGTTGAAGCAGACGTAGTAACCGAGCCTCCGTTTTCTAAGGGGACACTTCATGTTGGCAAACCTTACGTGATCAGCATCACTGTACTACGGGCTCAAGGGATTCCAGCTCAGTACACAGACATATTCTGCCAAATAAGGTTTCTCTGTAGCGAGGAGGATGAAGGGTTTTCCACTGAGCCAGTTTCAAATAAACAAAATGGAGGCCCGTTAGTTTTCTCCTATAACCAAAAGGTTGGAGTCGTGGTCAACCGAGAGTTCATAGACTACATCAGCACCAGTCCCCTACAGGTGGAGGTGTTTGGACACTATCAGCATCATCCACAGCATCTGTCCAGTAAACATCTTCCAAGGGCCATTGTGAAAGAAGGAAAATTGGAATCTAAGTCTGTAAAAGACACACCATCCACTGTTTCTCGGCCATATCAACTCTGTGAAGATGAAGGAACTCTGAAGTTTGATTTACTGGTGTGGGTTGAAGTCTACGAAATGTCACCAACTGGAGATTATTTTCCATGCGTTGTGAGACGTAAAGGCGAAGGCGGTCCATGTGGTGGCGTATTTCTTCTTCATCAGGGAATCCAAAGACGACTGGTGGTCACTATGATACACGAGAACTCTCCAGATATTAGAATAAGACGAGTTGTAGACCTGGTTGTCGGTCGTGTCCGCACCTCCCTTCTACCTCCCCCCGCGGGGGAAAGCTCGCCCCATACCGTCTCGTTGAACGTTTTGTCGCCTCAGGTCCAATCTCACCCGGATGAAAACAAATCGGTATTCAGGTTTGAGGCGGCCTGGGACTCGTCTCTTCACAACTCAATCCTGTTGAACAGAGTGACTCCACCAGGGGAGGTCGTGTTTGTTACCATGTCAGCGTATCTTGAGCTGGAAAACTGTTGCCAAAACTCGTGTGTTACTAAGGACATTTCTTTGTGTGTGTTTGGAAGGGACTCCAAAACGTCGTCCAGGTCTGTTTGGAATTTATTTGGCTCGTCAAGGCGTCCTGAGAATGATAAACTCAGCGATATATTTGAGCTTGTTTTTCATCCTGCTGATGAACATGGCCAACTGATGAAGACAAAAAAGAGGGTAGTCATGGATACGTCAAGTATTTATGTGAGAGGAGAAGAAAACCTGGGGGACTGGAGACCAAGAGGCACTTCACTCATCGACGAACATCAGGCGCATTTAGAGAAACTGGAACGAGTCCAAGAGGTTGGCAAAGCTCGTCATATCCTGTCCCTTGGAGACAAACTCATGTCCTCTGATCGCCCTGACACCGTGCTGGTTGATCCGGGAATTTTCTCGGACAGCAGTGCGTATTCCAGCCGGGGTAGCCTGGGCTCTATTTCCCTGTCCTCCTCGTTTCTGTCAGTGGCGTCACTTCCGGCTGGGAAGCCTCTGAGATTCACGAGAGATGTGCATCCGGAAAAAGTTAAAGAAAAATTATTAACGAAGTGTCTTCGACTCATGACGTGGAAAAGGGATTTTAGCGACGCGAAACTTTTGAGTCGGACTCCATCATCCGAGGCAAGCATAAACGAGCAGAACAACAAAGAAGAAGAATCCAAGATTGAGTATTATGTACCAGAAGTGACTCAAGTACGGAAAAACCCAGTAATAAGCAAACGAGGCTATCTTCACGTCATGGACGACTGCAGCTGCAAGTGGAGCAAGTGTTATGTGGTTGTAAGAAAGCCCTACGTCTTGCTCTATCGCCACGAAGGTGAACCGGTTGAGCAGTTCCTAATTAATCTCAAGCATTCCAAAGTGGAGTGTCCAGAGTATTTTGTGACGTTCAGCGTATTCTCAATGCGCACCAGACACTGCAGATTCCTTGTACGAACAACAACAGAGAAGGAAGAGGACACTTACGATTGGCTGTACGCACTTGACCCTCTGCTGGTGGGGAGCATGAGGTCACGAAAAGGAAGCTTAAAACAGGGTGAAAGGTGA

Transcript

ANN01918-RA

Protein

Uniprot

Uniprot term	Description
Q12756	Kinesin-like protein KIF1A OS=Homo sapiens OX=9606 GN=KIF1A PE=1 SV=2
F1M4A4	Kinesin-like protein KIF1A OS=Rattus norvegicus OX=10116 GN=Kif1a PE=1 SV=3
P33173	Kinesin-like protein KIF1A OS=Mus musculus OX=10090 GN=Kif1a PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00498	FHA	FHA domain	Family	Interproscan
PF12473	DUF3694	Kinesin protein	Family	Interproscan
PF12423	KIF1B	Kinesin protein 1B	Family	Interproscan
PF16183	Kinesin_assoc	Kinesin-associated	Family	Interproscan
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR001849	Domain	Pleckstrin homology domain	Interproscan
IPR000253	Domain	Forkhead-associated (FHA) domain	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR019821	Conserved_site	Kinesin motor domain, conserved site	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR022164	Domain	Kinesin-like	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR022140	Domain	Kinesin-like KIF1-type	Interproscan
IPR008984	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan
IPR032405	Domain	Kinesin-associated	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47117	STAR-RELATED LIPID TRANSFER PROTEIN 9	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10392	KIF1; kinesin family member 1	-	Cytoskeleton proteins	ko04812	deepkoala