Detailed information of ANN02019-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:37581170...37582984
NR annotation: XP_020626988.1, uncharacterized protein LOC110064292 [Orbicella faveolata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P31907Hydrogenase maturation factor HoxX OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) OX=224911 GN=hoxX PE=4 SV=2
B2I8S3Methionyl-tRNA formyltransferase OS=Xylella fastidiosa (strain M23) OX=405441 GN=fmt PE=3 SV=1
Q87AR0Methionyl-tRNA formyltransferase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) OX=183190 GN=fmt PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008745 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00378
all species →		ECH_1Enoyl-CoA hydratase/isomeraseDomainInterproscan
PF00551
all species →		Formyl_trans_NFormyl transferaseDomainInterproscan
PF02911
all species →		Formyl_trans_CFormyl transferase, C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001753
all species →		FamilyEnoyl-CoA hydratase/isomeraseInterproscan
IPR029045
all species →		Homologous_superfamilyClpP/crotonase-like domain superfamilyInterproscan
IPR011034
all species →		Homologous_superfamilyFormyl transferase-like, C-terminal domain superfamilyInterproscan
IPR047180
all species →		FamilyHydrogenase maturation factor HoxX-likeInterproscan
IPR002376
all species →		DomainFormyl transferase, N-terminalInterproscan
IPR005793
all species →		DomainFormyl transferase, C-terminalInterproscan
IPR018376
all species →		Conserved_siteEnoyl-CoA hydratase/isomerase, conserved siteInterproscan
IPR036477
all species →		Homologous_superfamilyFormyl transferase, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43388
all species →		HYDROGENASE MATURATION FACTOR HOXXInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0009058
all species →		Biological Processbiosynthetic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN02019-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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