Gene detail

Detailed information of ANN02061-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:38422976...38437211
NR annotation: KAJ7339590.1, Golgi transport complex subunit 7 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN02061-RA

ATGGATTTCTCTAAGTTCTCCGATGATAACTTTGATGTGAAAGAGTGGGTTAATTCAGCGCTGAGAATCCGCGACGATCGAACTCCTATTGACGCTCATGCATCAAACTTGGTCATGAAGCTACAGCTATTTATCCAGGAAGTCAACAATTCTTTGGAGGAAACCAGTACACAATCAGTGAATAACATTCCAAGAGTTCTGCGGGAGATAGAGAACATACGCCATGATGCTTCTCTTTTGAAAGAACAAATGACTTTAGTGAAGGAGGACATCAGAGTGGTTGAAGAAAATACAGCGCAATCAATGAAGATGTTGATGGAGCTGGATAGAGTGAAATCAAGGATGCAGGATGCTTCAAGGGCTCTGCAGGAAGCAGATAACTGGACAGTGCTATCTTCTGATGTGGATAAAGTATTTGAGTCAGGAGATGTCAAGGCTATAGCAGCAAAGCTTGAAGGAATGCACAGGAGTTTAACCAGCACCGTGGCTGTGTCTTCTTCGGATTCAACTGGTTTATCCGGAAGTTCGGTTCCTGTTCATTCGTTTTCTCCATTAGTTCCAGTACATTTGGTCTCCCCGTTGCAGTTATCCCAGTTTCAGGCAGAGTTGTGTGACTATCCGGATCGGATGGCAGCAGCCTATGTTCTTACCGGTCTCCGGGAGGGCTTCCACATTGGCTTTGAGACCTCATCAGTCAACCTGCAGTCAGCCTCTTCTAACATGCGATCTGCCCTTGTCCACTCATCCGTCATAGATGCTTACCTTGAGACAGAGGTTTCACACGGAAGAGTTGCAGGCCCATTTTCTCCTTTTCCTGACTTGCACATCAGTCGTTTTGGAGTCATCCCGAAAAGCAACCAGCCGGGGGCCCGAGGAGCTCTTATGGCCAAGTTCGATGTGGCGAGTGCCTATCGCAATGTGGCTATCCATCCCCAGGATCGTCCGCTCTTAGGAATGGTTTGGCGTGGCAAATACTACGTTGACATGGCTCTCCCATTTGGTCTGCGTTCAGCACCCTACATCTTCACGGCTATTGCAGACCTGGTTCAGTGGATGCTGACTCAAATCTATGGAGTTGACTTCCTTCGTCATTACTTGGATGATTTTTTGACCTTAGGTCCTCCGGCTTCCCCAGTCTGTTACAACAACTTACAGGCGTGCCCGTCTCCCAGCAGAGAAAAGAGAGAGGATCATTGCCCTGCTGGGTACTTGGTCAGCCGTGATGACCATCCCATTAGACTGAACCAGGAGTTTCATCGGGAATTGACATGGTGGCAGGAACTGTTCCAAAGCTGGGAGGGTCTCAGTTTCTTCCTTATGCCTTCGTGGGGCCCCCTTCCAGATTTCCAAGTGTCATCAGATGCGTCAGGCTCTCTGGGCTATGGAGCTATCTTTAACAACCAGTGGTTCTTTGGCGCGTGGTCAGCTTCACAGCAGCCCCTCTCAATTGCATACAAGGAACTGTTCCCCATTGTTGTAGCGGCGTATTTGTGGGGACCTGGGTGGGCGTCACGGCGGGTCGAGTTTTTATGCAACGAGTCTGTGGTGGCTGTTCTGTCTTCTGGTACCTCCAGAGACCCTGACTTAATGGGTCTGGCCCCGTCTACACGTCGGGTATACTCGTCCACCCAGCGTCGCTACTTCGATTTCTGCCATCAGGATGGCCAGCTGAGTCCAGATGGTGCTCTTTTGCCAGCTGATGAACAATCGCTCATATGTTTTGCTTCCTCTTTGGCTGACAGCCTACACCACTCGTCCATTAAAGTGTACCTCAGTGCAGTGCGGTCCTTTCACATTGACAATGGCTTACCTGATCCCCTGATTAACTGTCTGCGGCTACAGCAGCTATTAAGGGGCATTAAGCGTGTGCAAGGTTCATCTACCGCTAAGCGCCTTCCCATCACTATTGACCTCTTAAAGGTCATCCACCGATCCTTGGATCTGAATTTCTGGGACCATGTCATGCTCTGGGCGGCGTGTTGCCTCGGTTTTTTCGGTTTCCTACGAGCTGGTGAGTTCACCACAAATTCTTCATTTGACCCTAGTATCCATTTGACAGTTGGCGATGTGCAAGCGGATTCTTTGGTGGACCCCACATGTTTTAGAGTTCATATCAAGTGGTTGAAGACAGACCCCTTTCGTGTAGGCTGTGACATTTATGTGGGTCAGGGCAACAGCCTCATCTGCCCAGTGGTGGCCCTTGGTAATTTTTTGGCTCTGCCTGGCCCATCTCCAGGACCCCTGTTTTGCTATGCGGATGGCCGTCCTTTAACTCGACAGCAGCTATCATCCACGGTGCAGGCTATTTTACACTCTGCTGGTTATTCAGGCTCTTACTCAGGCCACAGCTTCCGGATTGGTGCGGCTATCACAGCTGCTGCACGGGGAATCCCTGATCACCTTATCAAGACTTTAGGCCGATGGTCTAGTGATGCCTATCAACTCTATATCCGTACACCACTTGGCTCTCTTACCCAGAGTGTGTTACAAGATGTCCCTGATTATGCACAGAGGCGCAGACTCCTTGAGGGTCTGAAGAACAGGCTGGAGGCTCTTCTGAGTCCGAAGATTGTGGCTGCTTTTAACAATCACTCACTTGATGACACCAAAGAATATGTTAAAATATTTACTAACATCGAAAGGCTGGACCAACTTCAGAATTATTACATCAGATGCCACAAGGCAAGTACCAGTTGTTTTGATATTAATAATTATCCTACTAAACTCCAAAAGACTTGGAATGAGGTTCGAGTCGAGGATCCAAACAAATCAATGCTGGAATGGTTATCAACGTTCTACGATGTTATCCTCTCAACTTGGCACACAGAGGTGACATGGTGTGGGCAGGTGTTCAATGAACCTGGCACTGTGCTATGTACACTTATTACTCAAACATTAATCCACCTGGACCCTTGTCTGTCTTCATGCATCACTGAGTTTATCAAGAGTGAGCCAAATATCATAGAAAAGTTGATAGAATTGCGACAGGTAACATTACGATTTGCTCATAGCTTAGAGAAGGCAGTTTCCCAGCAACAAGATAAATGTAGCACACTTTCAGCTGAATTGCTGGTTGAAGCAGTGTACTCACCTTATGTTCCATACCTGCTGGATTATCCCACACTACAGCAAACCTTTCTCACGGAGCAGTTACAGGCAACACGGCTGCATACAGATGGCTTCATGGAGACTGCAGGATTCATGGCTGAATCTGTAGAGAAAATATTTCATCTTTCGGAGCAGGCAGTGGAGTATTGTGTCAAATTAACTGATGGTTATGCAGCTCATGGGCTCTGTCATGTCCTGGAGGAATTCTTTGGTGCATATGCTGGACGGATGGATGAGTGCATTACTATTTTACGAAAAGACTGCTCCCTTGATATAGATCCTAAAGCAGATATGTTACCAAGTCAGGAACTCAGCGAGGACTGGACGTTGTTCCAGAATGCATTCCGTCTGATTCAGATTTGTGGAGATTTGCTTCTAAAACTGGAAAACCTGGACAAAAAATTAATTACTGCAATCCTTATGTCTGAAGAGGAAACAAATGCCCAAGAAAATGAAAAACTTCAAGAACCTCCACCAGCTCAGTCGAGACCTTTCCATTGGTACAATTATCTGCAAAATGAAAGACCTACTGAGTTTGGTGCCTTGAATGAATTAAAACAAAAGCTCCAAACAGGTATTTTGCAAGCTAAATTTGTTGGTATCTAA

Transcript

ANN02061-RA

Protein

Uniprot

Uniprot term	Description
P83436	Conserved oligomeric Golgi complex subunit 7 OS=Homo sapiens OX=9606 GN=COG7 PE=1 SV=1
Q3T1G7	Conserved oligomeric Golgi complex subunit 7 OS=Rattus norvegicus OX=10116 GN=Cog7 PE=2 SV=1
Q3UM29	Conserved oligomeric Golgi complex subunit 7 OS=Mus musculus OX=10090 GN=Cog7 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10191	COG7	Golgi complex component 7 (COG7)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR019335	Family	Conserved oligomeric Golgi complex subunit 7	Interproscan
IPR011010	Homologous_superfamily	DNA breaking-rejoining enzyme, catalytic core	Interproscan
IPR013762	Homologous_superfamily	Integrase-like, catalytic domain superfamily	Interproscan
IPR010998	Homologous_superfamily	Integrase/recombinase, N-terminal	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21443	CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006886	Biological Process	intracellular protein transport	Interproscan
GO:0017119	Cellular Component	Golgi transport complex	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006310	Biological Process	DNA recombination	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0006890	Biological Process	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	Interproscan
GO:0007030	Biological Process	Golgi organization	Interproscan