Gene detail

Detailed information of ANN02073-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:38605181...38621683
NR annotation: CAH3041808.1, unnamed protein product [Porites lobata]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q19UN5	CDK5 regulatory subunit-associated protein 2 OS=Pan troglodytes OX=9598 GN=CDK5RAP2 PE=2 SV=1
Q96SN8	CDK5 regulatory subunit-associated protein 2 OS=Homo sapiens OX=9606 GN=CDK5RAP2 PE=1 SV=5
Q9BE52	CDK5 regulatory subunit-associated protein 2 OS=Macaca fascicularis OX=9541 GN=CDK5RAP2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001978 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07989 all species →	Cnn_1N	Centrosomin N-terminal motif 1	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042791 all species →	Family	CDK5 regulatory subunit-associated protein 2	Interproscan
IPR012943 all species →	Domain	Centrosomin, N-terminal motif 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46930 all species →	CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000132 all species →	Biological Process	establishment of mitotic spindle orientation	Interproscan
GO:0000226 all species →	Biological Process	microtubule cytoskeleton organization	Interproscan
GO:0000242 all species →	Cellular Component	pericentriolar material	Interproscan
GO:0000976 all species →	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0001578 all species →	Biological Process	microtubule bundle formation	Interproscan
GO:0005516 all species →	Molecular Function	calmodulin binding	Interproscan
GO:0007059 all species →	Biological Process	chromosome segregation	Interproscan
GO:0007099 all species →	Biological Process	centriole replication	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0019901 all species →	Molecular Function	protein kinase binding	Interproscan
GO:0031116 all species →	Biological Process	positive regulation of microtubule polymerization	Interproscan
GO:0035371 all species →	Cellular Component	microtubule plus-end	Interproscan
GO:0043015 all species →	Molecular Function	gamma-tubulin binding	Interproscan
GO:0045893 all species →	Biological Process	positive regulation of DNA-templated transcription	Interproscan
GO:0046600 all species →	Biological Process	negative regulation of centriole replication	Interproscan
GO:0048471 all species →	Cellular Component	perinuclear region of cytoplasm	Interproscan
GO:0090266 all species →	Biological Process	regulation of mitotic cell cycle spindle assembly checkpoint	Interproscan
GO:0097431 all species →	Cellular Component	mitotic spindle pole	Interproscan
GO:0005815 all species →	Cellular Component	microtubule organizing center	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN02073-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.