Gene detail

Detailed information of ANN02377-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:43728699...43731233
NR annotation: KAJ7372274.1, hypothetical protein OS493_019718 [Desmophyllum pertusum]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN02377-RA

ATGGAAGGAAAGAGGACTAAATCTCCATGTGACCCGATCATTATTCTGTCCAGCGATGATGACGAGGATGAAGATGTGGAAGAACTCTTTAACGAATTTGTTTCTAAAGTCGAGCGATTTGTCGCACAAAAAGAGGTTGTGCTTTTACTCAAACTGAAATTCGCGGAGGCTCGACCAGAGTTCGTGTCGTCCGCGAAATTCAAAACAGCGCTCGGGTGGAGAACTAAACAACTGAACGAGAAGAACGGATATATTTACACGGGAGACATTTGCAATCTTCTCACTGCAAATTCAAAGCAAGATAGCTGTACATCAAAATCGGACTGTGAGAAATTAGCAGTGGAAATTGATACGAGTTCACCAGTTAACAATGGCGCGCGACACTCGACACGCGAGGAGGCGGATGAAAACAAACCCATTATCCAAGTAACGATCGATAATCTTGAAGACGACAAACCCGCTACCAGTGAAGAGAAAATAACTACCGAAGTGGTTAGCTCTCAGCCAAGTACAAGTTCAGCTACGGCTTCTACGAGTACGCGCAAGAGAGCCCGTTCTAAACTTCCATTGACTCCTCAAAAGCGAAGATCTCTGATCAGAAAACTGGAAGGGAAACTCAAGCACATAAGTGAAAGAATAAAGATTTTAAATCAAGCAGAGTTGAGCTTGGACGAGATGAACATGAATGACAGTACATACATTCAAGAATGCCGATTAAAAGATCGTTTCAATCGAATCTGGGATAGAATATGTAAAATACAAGAAAGACCCTCAGACACCGGACGGGTAACTGAGAAGGAAGTGAAATGCCCGCAGACAGGGTTCCCGGAAATTGACAGAGCTATGAACAAGTTTTTAAAGACAAACAAAGGACGCTTCCCAGATAGATTTGACATTAAAAATGTCTTTCTGGAAACAAATAAAAAGCATGGTTTGAAAATGACCCCTCAAGTGCTCAATGAGATTGTTGATGATGTCTTTGTAAAGATTGGTAACAAGTTGCAAAAGAGGCGGAAGCACGATTTGGTGTTGAATTTCGGTTGCTTCCTCACTGACAATTATCTTGCAAGCAATGACCCTGCCTTAAATAATCCTGCTCTTCTCAAGAAACTCGAAGAGAATAAAAGAGTAAGCAAAAGGTCTCTGGATGAAGTTTTTAACAAGTATACTCACTATGGACGCATGAGAAATCGTGGAGATACTGACGACTCAAGCAGCAGTGAATCTGAAAACGCTGAGCCAGAAAACAGAATGAGAGGGAAAAGAAAAGGGAGATTTTCTCACATTGCTGTTGCCGAGTCATCAGATTCCAGTGACAATGAATGTGATGATTTTGGATTGGAAATTGGGGGTACAGATGACAATGACCCAGCCAAAACGGAGGAGCAAAGCACTGTCAAGGAGACACACTCAGTTTCTAGTGAGAGTGACCTTGATGATTTCGTGATAAGGAGGTCTCATCGAGTGACTGAAAGAACACAACCCACAGAAAGTGAGACTGACCATGATGATGAAAACAGTACCGAATTGCAATCAAATCAAATTGATCTTGGCAGTAACTGTGCTGTTGTACAGTTACCTTCTTCTGTTTTAGCTGAAAGCACTGACATTTCTGTCGAGCAGACAAGTATTGCAGAAATACAGCAATGTAGTACTGATACTCCAAGGATTACTCAGCAGCAGTTTGAGGCTGAAACCACAGTGGCACCAGACAGTAACCAGAAGCAAGCTGTACTGAGTGTGTCAGAAGATCATGAAGTTACATCTGTGCAAGGCATTTCTCAATGCAACAATTTAGAATCTAAACATGTGCAAAACAGTGATTCTGGGGAGAAATTTGATTCAAATCTGGCCGAGGTAGATTTGATCACAACAGCAGGATCTCCTGGATCAAGAAGCGTCCCAGCAGCTGTGGTCTCCTCTGATGATAGGAATAGTGTTTTGACGGACTCTGTGCAAGTCGATTCATCTGATTCTTTCAATCGCGTTGATGATGAAGTCAGCACTGAAAAATGTTCAAATGAAAATGGAAAGCATGAAATCTGTTTTCTTCCATCCAGGAATGGCAACAGTATTGCAAGCAGACTCTCTGATAAACCAACTCTTGTTATCCCTTTAACGCCTGTGTCTCTAAAGGCTGGAAAGTCATGTTTGCTCTCTCCTAGTACCAAGAAAAGAAAGGCAGAAAATGGATTGCTTGATTATGAATCTCCGCTTAAAATTTTTCGGAATGCAACCTTGGAAATTGTGGGAAAGAAGAATGATTTCTCTGTTGCTAAGACAGACACTAGCAAACAGAAAGCAAGCTGTGAAGAAAGTGCTGTATCCGCTAGAAGTGAACATGATGAACATTCTGTTGTTGTCATGAATAGCGTTCCAGCTACAGTAAATGGTCATTCTCTCTTGCGCAAAAATGTACCAAGGAAACTAGCTTTGTCTTTATACAAAAGTGGTAGAAATTCACCCAAGAAACAGGATGTTCCTGTCAACGTATCTGATGTAATTGTATTGTCAGATGACGACAGTGACAGTTAA

Transcript

ANN02377-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5TJE1	Death domain-associated protein 6 OS=Canis lupus familiaris OX=9615 GN=DAXX PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009990 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20920 all species →	DAXX_hist_bd	Death domain-associated protein 6, histone binding domain	Domain	Interproscan
PF03344 all species →	Daxx	Daxx N-terminal Rassf1C-interacting domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR046426 all species →	Homologous_superfamily	Daxx, histone-binding domain superfamily	Interproscan
IPR046378 all species →	Domain	Daxx, histone-binding domain	Interproscan
IPR038298 all species →	Homologous_superfamily	Daxx, N-terminal domain superfamily	Interproscan
IPR031333 all species →	Domain	Daxx, N-terminal Rassf1C-interacting domain	Interproscan

PANTHER

No PANTHER signature was detected for ANN02377-RA. This gene does have a gene model — the search simply returned no hit.

Gene Ontology

GO term	Category	Description	Source
GO:0042393 all species →	Molecular Function	histone binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN02377-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.