Detailed information of ANN02489-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:45718523...45736166
NR annotation: XP_027044203.1, CAP-Gly domain-containing linker protein 3-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B9EHT4CAP-Gly domain-containing linker protein 3 OS=Mus musculus OX=10090 GN=Clip3 PE=1 SV=1
Q96DZ5CAP-Gly domain-containing linker protein 3 OS=Homo sapiens OX=9606 GN=CLIP3 PE=1 SV=3
Q5R686CAP-Gly domain-containing linker protein 3 OS=Pongo abelii OX=9601 GN=CLIP3 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00397WWWW domainDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002110RepeatAnkyrin repeatInterproscan
IPR001202DomainWW domainInterproscan
IPR036020Homologous_superfamilyWW domain superfamilyInterproscan
IPR050663FamilyAnkyrin Repeat and SOCS BoxInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24193ANKYRIN REPEAT PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20803UBE3D; ubiquitin-protein ligase E3 DEC:2.3.2.26
Ubiquitin systemko04121deepkoala

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