Gene detail

Detailed information of ANN02520-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:46418052...46419053
NR annotation: XP_029182738.2, uncharacterized protein LOC114950765 isoform X1 [Acropora millepora]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007138 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00619 all species →	CARD	Caspase recruitment domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011029 all species →	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR001315 all species →	Domain	CARD domain	Interproscan
IPR033238 all species →	Family	B-cell lymphoma/leukemia 10/E10	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR34920 all species →	B-CELL LYMPHOMA/LEUKEMIA 10	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0042981 all species →	Biological Process	regulation of apoptotic process	Interproscan
GO:0002250 all species →	Biological Process	adaptive immune response	Interproscan
GO:0003713 all species →	Molecular Function	transcription coactivator activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006915 all species →	Biological Process	apoptotic process	Interproscan
GO:0007249 all species →	Biological Process	canonical NF-kappaB signal transduction	Interproscan
GO:0019209 all species →	Molecular Function	kinase activator activity	Interproscan
GO:0032449 all species →	Cellular Component	CBM complex	Interproscan
GO:0043422 all species →	Molecular Function	protein kinase B binding	Interproscan
GO:0051059 all species →	Molecular Function	NF-kappaB binding	Interproscan
GO:0051092 all species →	Biological Process	positive regulation of NF-kappaB transcription factor activity	Interproscan
GO:2001238 all species →	Biological Process	positive regulation of extrinsic apoptotic signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN02520-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.