Detailed information of ANN02563-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:47150265...47156725
NR annotation: CAH3021424.1, unnamed protein product [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6IND6Abasic site processing protein HMCES OS=Xenopus laevis OX=8355 GN=hmces PE=1 SV=1
Q6P7N4Abasic site processing protein HMCES OS=Xenopus tropicalis OX=8364 GN=hmces PE=2 SV=1
Q5XIJ1Abasic site processing protein HMCES OS=Rattus norvegicus OX=10116 GN=Hmces PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007145 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02586
all species →
SRAPSOS response associated peptidase (SRAP)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036590
all species →
Homologous_superfamilySOS response associated peptidase-likeInterproscan
IPR003738
all species →
FamilySOS response associated peptidase (SRAP)Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13604
all species →
DC12-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003697
all species →
Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0006974
all species →
Biological ProcessDNA damage responseInterproscan
GO:0106300
all species →
Biological Processprotein-DNA covalent cross-linking repairInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN02563-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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