Detailed information of ANN02594-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:47698900...47706469
NR annotation: XP_020602293.1, E3 ubiquitin-protein ligase CCNB1IP1-like [Orbicella faveolata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
D3Z3K2E3 ubiquitin-protein ligase CCNB1IP1 OS=Mus musculus OX=10090 GN=Ccnb1ip1 PE=1 SV=1
Q9NPC3E3 ubiquitin-protein ligase CCNB1IP1 OS=Homo sapiens OX=9606 GN=CCNB1IP1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004435 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14634
all species →		zf-RING_5zinc-RING finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR042448
all species →		FamilyE3 ubiquitin-protein ligase CCNB1IP1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14305
all species →		E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000795
all species →		Cellular Componentsynaptonemal complexInterproscan
GO:0007131
all species →		Biological Processreciprocal meiotic recombinationInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN02594-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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