Gene detail

Detailed information of ANN02633-RA in Montipora grisea

Genomic Location: Scaffold_10__1_contigs__length_71276496:12269960...12289299
NR annotation: XP_029186931.2, rap guanine nucleotide exchange factor 6-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN02633-RA

ATGCACTTGAAGATCGGCACTTTCCCGAGAATCGTACGGAAGCCTTCATTTTCTCATCTTCATCCTTCTAGCACAACTGAACGAGTCAAGAAAGCCTTAAACAGACTCAGCGTGATTGGAACACTCTCAAGGAACACCAAACTGATTTCCCGGAGTGAAAGAGACCTTTTAAGCATGGATCACGACTCCACGGATGAGATGCACGTTCTGGCCCGCCATCCTGTGAAGAAGCAAAGAGTCAGTCTTCCAAGAGGATTCGGGTCAACAGAGTGCATATACACCAGTGAACAGAACGGCGATATGCCTGATAAAGTTATCAAAGTCTACAAGGCGGACCAGACTTGTAAATATTTCATGGTGTACAAGGAAACCACAGCCAGAGAAGTGGTCAATCGCGCATTAGATGCCTTTGGCATCCAAGATTCTGCAAGTAACTACTCACTATGTGAGATAACTGTAGAAGATGAGGGATTCATCAAACAGCGCAGACTACCTGACATGCTGCATAACCTATCCGATAGGATTCACTTGAATGGAAGGTACTACTTGAAGAACAATCTTGTGTCGGGCTCTCTTCTTCCTGACGAGGCTGCTCAGGAACTGGCCAAAGAAGCTAATTTTAGCCTACTGCAACTCAAGCCACGGGATTTGGCAAAGGAGATAACGTTGCAGGCAAGCTTATTAATTTCTTTGCTGACGTCTGATTTTGAAGTCTTCAGAAGCATTGATCCTCGGGAGTATATATACAAGTTATGGAACTTTGGTCCAAAATTAACGGAGAACTTGAGAAAATTTTCGGAGATTGTGAATAAAGAGATGTTTTGGGTTGTAACAGAGATCTGCAACGAATCAAACTTAGTCAAGCGTATGAAGATAATCAAGACTTTTATCAAAATCGCAAGACTTTGCAAAGAGTGCAAAAACTACAATACTTTGTTTGCTATTGTAAGCGGTCTCGGCCATTCAGCGGTGCGGCGGCTGAAGAACACGTGGGATAAACTACCCACAAGACATAGCAAGGCGTTTGAGGATCTTCAGAGTCTTATGGATCCCTCGAGGAACATGTCCAAATACAGGAATTTGCTGAACGGAGAACACGGTGAACCGCCCCTGATTCCATTCTTTCCAGTCATCACCAAGGACTTAACGTTTATCCATTTGGGAAATGATAGCATTGTGGATGGCCTGGTAAACTTCGAGAAGCTTCGACTCATCGCCCGGGAAATTCGCCAAATTTCCAAGTTCAACTCCATTCCTTACGACCCCGAAACAATGTTCGAAGAGGATCCCAACAGTCAGGGTGGTCCTGGGCAACAGAAGGTGACATCAACAGTCGTTGGCATGGTGACGGGTAGCTCCAACCGCCGGTCCTTGCGTGACCAGAATCCTAAAAAGATGTACGAAGAGTCCATGATGTCACGCAGAGTCAAGCAATATCTCTCAGGCCTAACCATAATACAAGATGAAGAGAAACTACGTGACATGTCAAACGCTTGTGAACCTCCTCAAGGGTCAGCTCCCCCCAGCGTGCAAACGCGCAAGAAAAATTCGCCCACGTCTTCTCCGGTCGCCAACCCAAGAGATCGGAAAGGAAGCAAACCCCACGAGTTAACAGTTCCATCGCCATTAGCACTTAAAAAAGACCTGGTTGGAGGCGATCGAATCTCAGTGTCCTCCACAGCAAGTTCATCGTCCCTAGCGGAACCAGACGTACAGTCACCAAAACTGCTACCAGAAGACGAAGTACAAGTTTTCCCTGAAAACGACCGAACGTCCTTTCCAGAAGACACAGTTCATATGCAAGAACTGAGAAGATTACACATCAATGATGAACATAGAAGACCGCATTATCGACATCCACCAACATTGGAAGTAATCCGACCCTTACATTATTCAGCTTCAGCAGAAAGTTTACCGTACAGCTCAAATCACTCGACATCCTCGCAAGATCACTCATATCACCCTGGTAAGTTAGTCGTTTGTAAGGAGGGTGGAGTGACGTACCAGTATAACGCTTACCACTATCCGACAGACCAATATAGCAGAGTGGAAAGAAGAGGGACAAGTTTCAGCGGTCTGACGGTTCGACAGAGGTCTCAAGGACTTCCATCAGGCAGCCACCTTCTCGCTCTCCAAGAAAATAGAAATGTCAGTTTTAAGCTAGTCTGTTTCTATCCTTCACATTTGCGGTAG

Transcript

ANN02633-RA

Protein

Uniprot

Uniprot term	Description
F1M386	Rap guanine nucleotide exchange factor 2 OS=Rattus norvegicus OX=10116 GN=Rapgef2 PE=1 SV=2
Q9Y4G8	Rap guanine nucleotide exchange factor 2 OS=Homo sapiens OX=9606 GN=RAPGEF2 PE=1 SV=1
Q8CHG7	Rap guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Rapgef2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00788	RA	Ras association (RalGDS/AF-6) domain	Domain	Interproscan
PF00617	RasGEF	RasGEF domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000159	Domain	Ras-associating domain	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR001895	Domain	Ras guanine-nucleotide exchange factors catalytic domain	Interproscan
IPR023578	Homologous_superfamily	Ras guanine nucleotide exchange factor domain superfamily	Interproscan
IPR008937	Family	Ras-like guanine nucleotide exchange factor	Interproscan
IPR036964	Homologous_superfamily	Ras guanine-nucleotide exchange factor, catalytic domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23113	GUANINE NUCLEOTIDE EXCHANGE FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0005085	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0007264	Biological Process	small GTPase-mediated signal transduction	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007265	Biological Process	Ras protein signal transduction	Interproscan
GO:0016324	Cellular Component	apical plasma membrane	Interproscan
GO:0043547	Biological Process	positive regulation of GTPase activity	Interproscan