Detailed information of ANN02642-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:48612565...48623844
NR annotation: CAH3042749.1, unnamed protein product [Porites lobata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6DG03Cyclin-D-binding Myb-like transcription factor 1 OS=Danio rerio OX=7955 GN=dmtf1 PE=2 SV=1
Q9Y222Cyclin-D-binding Myb-like transcription factor 1 OS=Homo sapiens OX=9606 GN=DMTF1 PE=1 SV=1
Q66HG1Cyclin-D-binding Myb-like transcription factor 1 OS=Rattus norvegicus OX=10116 GN=Dmtf1 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001368 (this species only)

 Pfam domain
No Pfam domain signature was detected for ANN02642-RA. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR001005
all species →		DomainSANT/Myb domainInterproscan
IPR051651
all species →		FamilyDMTF1 DNA-binding transcriptional regulatorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46380
all species →		CYCLIN-D-BINDING MYB-LIKE TRANSCRIPTION FACTOR 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000976
all species →		Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700
all species →		Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN02642-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP