Gene detail

Detailed information of ANN02667-RA in Montipora grisea

Genomic Location: Scaffold_10__1_contigs__length_71276496:13792620...13858274
NR annotation: XP_029186949.2, LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein 210-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN02667-RA

ATGCCGCTGTCCACAAGGCCGCACGTGGTTCGAGCTTCCAAGATGGCATCGTTGAGCTGGGTGCTTTTCACTGCACTTTTGCAAAGATTTATTCTAGCAGACCAACAGCAAAACACGCTTAACGTTCCACAAGTGCTACTACCATTTGCTCCTAGAGGATCTGTACACATTAATTTCACTTTAAAAGCCTTTCAAGGATGCTACCAATGGGCGTCTAATAGACCTGAGGTTGCAACCATTCAGCCTGTGTATAGCAGCGAGGAAGAAGAATCAGCTAAGAAGCTTGGCAGGAAATGTGCAAGGGAAGCAATGGTAACAGCACAAGCAAGACTCCCTGAAAGGCAAATGACAGAAATCTTAGCAGAAGAGGAAGTGACTGGGATGGTTCTGCGAAGTGATGTTGCTGTGGACACCATACACAAGATTGAAATTATGACCACCACAAGAGAACTGTTGCTTGGAGAACCACCTGAGGTCTGTCACATCAAGGCATTTGATACAGAAGGTAATGTTTTTTCCAGTTTAGAAGGTATTGAAGTTACATGGGAGCTTAAAACTGTGGAAGGAGTGGGTTCTGTAAATGCACAGTCAGTTTTGAGGTTCATGCAGTTTGAGTTATCAAGTTATGAAACTTCACCTGAAATTTATTCTTTGGAAGAAAAGGGTGTACGTGGTAGCAGTGTCGTCCTTGAACCCATCAACACAGGAACAGCCATTGTCAAAGCAAAGCTAAAGGACAGAGCCTTTGCTAATGTGACTCCAGCACAAGTGAAGGTCATCGTAATGGATAATGTGATGCTCAAACCGGGATGTGACGTGTACATTGTTATCAACACGTCCATCACTTACAGTGTTATCAGACTGCGTCAAGGAAAGGCAACAGTTGTTCCAATGCCATCTTCACAGTTTGAGTTTCAATTAAGTAATACCACAGTGGGGAAGTTGGACGTGAAGCAATCAAGTGTGCTGGGCATTGAGTTGGGTTACACTAAAGTCACTCTAGTTGACAAAAATATGTTACACGTTCATGCTGTCCACCAACCCGCTGCTGGCATTTTTGTTGTGGAACCAACATATTTAGGTTTTAGCATATGGCCTCATCCCGACTGGGTTCTTCAAGTTGGTATTGAGTATGAGGTATCTGTGCAGATCTACACTGAAGACAATCGCAAGATCTTCATCTCTGATAATATACAGATATCAACATCCTTTGATGAGGACTATTTTCAACTACTCTGGTCTTCCAAGAATGGATCATATCATCGTGTTAAAACTCTACGGAAAGTAAAGAGAACTGTGATAACTGCTGTGTACACCAGTATTGAGATTCTTGAAAAGGATACGATCCACACATTTGACCGCCCCATCTCAGGGCAACAAGAAGCTGAGATATTTGACCCAGTGGATGTTATTCCTGATATAGTGCTGTTCCCATGGTACCCAGTGGCACAAAAGAATGTTGCTGAATATAAGCAATTCCAGTATTTACTGGAGCCATCAGGGGGTAGTGGTGCATACATTTGGACGTCATCCAACACTTCCGTAGCCACAGTGAGTACCAAGGGAATGGCTATGACAACCAACGCAATTGGACACTCCCAGGTTCGGGCTGCAGACATGAGGAACCCAGCAAACTTTGGCTCATCTGAGGTTTACGTCCTTGAACCCAAGAAAATGGAATTTATACCTTCCGTTGTTGAAGCACAGGTTGGCAGTCCTCTCACACTGCCCCTGGCTGTGGCCTCTTGCATTTCCACAGATTGTCAAGAGTTGCGTGTTTTTACAGACTGTCGCTCTCTTCCTGTGACATACACATTCTCCGATCCATCAATCTTCAAGCTAGTAGAAGATAGTAGTGATTATGAAATTGCACTTGGTAGCTGTTTGTCGGTTAGACTGGTTGCTCTTCGTGCTGGTTTCACGTCACTGACTGTCACGTATCAGTATCTAGACATTTTACTCAAAGCTACCGTCACTGTTGGAGCCTATCTTCCACTCAGGGTGCTAGATCCGGTTGATATCGGTGTTGTATCCCTCTGTTCAACGAAGAATCTTATGTTGGAAGGTGGACCGCTTCCGTGGATTATTGATACCTCAGGCTACTATGAAGAAGTCCATCCTGATCCCAAGAAAGCTAAGGAGGTGTCCATTGGTCATGACCATACTGCAGATTATCCAGTGGACCATACTGGGTCATATCACTATTTTCACGTCATTTGCCTGAAGCAAGGAGAACAAGTTTTAACTGTGAAAATTGGAAACAATCGGTCAGCAAAGAATCCTTATCCAGCAAGCTCATCTGCGAAAATCAGATTTGCTTGCGTGGATCCCTCATCATTGACCATTGTTCCCGATATAAAATTACCAACTGTGGATGGCCGACAACTTTCTCCAGAGAATTGTGTCAGCTCAAACAAAGAGATTCACGTTCGAAATAATCAGAAAGTCAAGCTGGTTGCCAACCTGCGAGACTCCCTTGGTCGTACATTTGACAACTTTACCTCGTTGAAAGTGCAGTGGACGACAAGTGATGATGCTTTGGCCGAATTTGTTGACCTAGCGACGTCTGTAAAGATGATGTTTGTGAGTTATAAGGAAGATGAGGATCTCAGAAGAGCAGTATCTTATCAGACAGTGAGTTTGAGCGACAGAATAGGTGTAGTCACCATCGAAGCATGGATTGAAAAATATGATTGCGTCACTCTGACTTCGTGTGGTCAGGAATTAAAGGAACCTGCTAATTTCTCACTTCGTGGACATCTCAAGTTGTTACTGGTGCCTGAAAGAACACTAGTTCCTCCGTCGGCCTCTATCTTAAACCATCCAGATAGTCAGGTCCTTTTCCACATTGAGGGAGGCTCAGGGCGATTTGCCGTGAAAGGAAGCAGTTCTTCCATTGCCAAAGTTGATTACAAAGCGAAGAGTGAATTTCTGGTAATACCGCGTTCCGAAGGTCTGTTGACCGTATCAGTCTATGATCTGTGTTTAGATTCCACCGGTCCAGCTATCTTACACGTGCAAATATCAGACGTGTATGGAGTGGATGTTGCTGTCGTCAACAAGATTGAGGTTTATTCATCCGAGACCCTCAGACTGCAGCTGTTGGATGTATTAGGGACCCCACTACTGCTGGGGAGTCTAAAGTTCCTGACTTTGACACCGCACTTCAGTCCTGATATACTTAACATCAGACGAAATGTGGACGTAGATGAAAGCAGCGATGGGAACCAAGACACAGCATTCTTTACTGTGAGAGGTGTGTCTCTTGGCACTGCGAGCCTCACCTTTACAGCATCTGCGTTAGGAAAAGGAAGCGCCACAAGTGAGCCGAAAGATATTCAGGTTTTTGCACCTCTGCGTTTGGATCCTAGAGTTGTCGTTCTTGTGCGCGGGGCAACTTTTCAGGTTCGCAGCACGGGAGGTCCCAGTCCGCAGGCGGCAACAGTCTTCAACATTGCCAATCAAACGGTAGCGACTGTCAGCAGTGTTGGGCTGGTGGAAGCACAACAGATTGGCACCACTAATTTGACAGGACTGGTTCAAGCTGCTGATCCAGCTAAAGGACAAACACTACTGTTTTCTAAGGATGTCATCTTTATTCACGTTGTCCAGCTCTACGGAGTGAAAATCAACGTTGCTTCTACTAATCTCGTCACGGGGACAAAGATAAGCATGTATGCTACCGGTTTAAATGATGAAACACCCTTTACTTTTGCCAATGCAATACCTGGATTGAAGTTTTATTGGAGTTCCTCAAATCCTGATGTATGTCAAGTCAGGTCTGTTTATGCGCTGAGTGGAGTTGCTGTAGAAAGCGAAAATGATTTCCGTGTTGATTTGCATTGTATCAATCCCGGGCAAACTACAGTGAGACTTAGGATGGAGATCGATGACCAGAGATATCAGCAGGCTCACTCTCAGGCTTTACGAGAAGATGATGTAACATTTGAGGTGTACGAAAGACTTCAGTTGATCTTTCCTGCTAGTGGATTTCTCCTTTTGCCAAACAATGTCAACACCAAAATTAAGACAAACAGGGATGGCTCAGCTAGCATAACGTATGAGCTCATCACAGACTGTTCTCAGCGTCATGTGGGATTTAACACTCCATCAGTTGTAACCATCAGCAAAGCGGGTCACGTTTCCACTGCTTCGCTGTCTGGTACAGCTGTTGTACTGGTGACTGTCCATGAAGAGTTTGGCATCAATCAGACGGCTGTTGTTCATGTGGAGGTTAAAGCAGTGTCATCACTGGCCATCACTTGTCAGTCTCCCGTCAGAGCAAACTCGGAGAAGTTGCAGACGTTTCCTCTCGGAATGAACGTGCTGTTTGCTGTCACCTTACACGACAACATTGGACGCACGTTTTCAGTGGCTACTATTCCACTCAAGTTTGATGCAGTTCATGTTGTACCTGGGCCTGAAAATGGCACGTTCTTCGCACGCGCAATGAATCTTGGTGAAGCTATCCTTAAGGTGTGGGATCCAAGTGCTGCCAACATAGCGGACTATATACGTATCAGAATAGGACATGGATTGACTCCTACCAAAGCCACTCTGTTGCTAGGAACCGTACAACAGTTCAGCACAAGTGTTGTGTCAGAAGGCGTAGGAGGTGCGTGGTCATCTTCGAACATCCGGGTACTCGATATCAATGCAACGACAGGTGTTGCTATGGCAATGGCAGCTGGAACAGCCACAATCTATTACAAGATCCCAGGCCTTTACTCTGCTCAAACCGAGGTGAAGGTTGAGAGTCTCAGTTACATCCGCGTCGAAATAGATGACTCATTGGTTATCACCAATCTCCCTCGAGCCGATGGCCGCGGTTACGTTATTCCGATTACCCTGGGGCATGATCGTCTCCCCAGGGAAGACACATCCGAAGTTTCTGGCCAGGGAGATGGCTTAGTCCTCTATCAAGGCGCCATGCCGTTTGAGTGTATCGTTAGCTCCGATTTTGATATATTCGGACATGACAACTTGGACCAGTTCTTCGACGTAAAAGCTGGTATGATCAGTGGAAGACCGATGTGTTATGTGATCCCGAGGGATCAATCAACAGACTCTGTTCGGGCAGCTTGCACCAGCACGGGCCAATTGATGCTTAGAGTCGTGGTTATGGACGAGATTCAGGGCGGAACCATCTCCTCCGGAGCTGTGACTCTGCCGTTTCTTCCCGCGTTTGTTGTAAGCGTAGCAGAATTAGAGCTTTCAGCCGACCGACCAGACGATTTCATTGTTGTCACGGGAACAGCAAAACAGCTGAATAGTATTGAGGTGAGAACCCTGGATCATTCGTTGGTTGAGGTTATATCACAGCCACCCAGGGCTGACACTCAACAGGAATACAAGATAGCAGTGGCGGGGGCGAATCTTAAATCTTTCAAGAAAGTTGGCGTGGAATTTAAAAGCAAATTAACGGGCCAGAGGGAGATGGTGTACGTGTCTTACGCGCCTCCCTTTGGTAGCGGCGCTGTACCCGTCATATACCCTGGTGCTGCTTTAAGCAACCAGCAGTGCCCACCACCAGCAGCAACATCGACGGATAGGAGCTTCCAGGGGCTTTTTCTGGCCTTGCTTGGCCAAACGAGTGCATGGATAATCGGGTTCTCAATATTTATCGGCTTGCTTATTCTCGCGCTTGTCTTGTGTTGTAGTCCACGAAACACGAGCGGAGCCCAGAATGCTGGTATGCGAAGCCCCGGACCCAGGTACGATACACCTTACGGAGTTACTCCGCCCTATGGGAGCCCATACGGGCAGAGTCCATCTCAAGGATCATATTCCGCTGGTAGGGGCCCCTATTCAGCGAGCACTTACGCTGGGTACCGCTCTCCAGGGGACGCATCGGGTAGGTCCATTCCTGAGGAAAACCTGGACGAGCCTCGCCGAGAAACTTTTTCAACGTACAGGCGCACCACTACTTCGACGGCCAGCCGCTCATATCTCTCGGATAACCCGTCACAGGCGCCAGGTGGCGCGCTCTCTTTGGGCCGCACCTCCCCTAGCAAGTCCCCAGGACTCTTCAGCGTCACGCAGTAA

Transcript

ANN02667-RA

Protein

ANN02667-RA

MPLSTRPHVVRASKMASLSWVLFTALLQRFILADQQQNTLNVPQVLLPFAPRGSVHINFTLKAFQGCYQWASNRPEVATIQPVYSSEEEESAKKLGRKCAREAMVTAQARLPERQMTEILAEEEVTGMVLRSDVAVDTIHKIEIMTTTRELLLGEPPEVCHIKAFDTEGNVFSSLEGIEVTWELKTVEGVGSVNAQSVLRFMQFELSSYETSPEIYSLEEKGVRGSSVVLEPINTGTAIVKAKLKDRAFANVTPAQVKVIVMDNVMLKPGCDVYIVINTSITYSVIRLRQGKATVVPMPSSQFEFQLSNTTVGKLDVKQSSVLGIELGYTKVTLVDKNMLHVHAVHQPAAGIFVVEPTYLGFSIWPHPDWVLQVGIEYEVSVQIYTEDNRKIFISDNIQISTSFDEDYFQLLWSSKNGSYHRVKTLRKVKRTVITAVYTSIEILEKDTIHTFDRPISGQQEAEIFDPVDVIPDIVLFPWYPVAQKNVAEYKQFQYLLEPSGGSGAYIWTSSNTSVATVSTKGMAMTTNAIGHSQVRAADMRNPANFGSSEVYVLEPKKMEFIPSVVEAQVGSPLTLPLAVASCISTDCQELRVFTDCRSLPVTYTFSDPSIFKLVEDSSDYEIALGSCLSVRLVALRAGFTSLTVTYQYLDILLKATVTVGAYLPLRVLDPVDIGVVSLCSTKNLMLEGGPLPWIIDTSGYYEEVHPDPKKAKEVSIGHDHTADYPVDHTGSYHYFHVICLKQGEQVLTVKIGNNRSAKNPYPASSSAKIRFACVDPSSLTIVPDIKLPTVDGRQLSPENCVSSNKEIHVRNNQKVKLVANLRDSLGRTFDNFTSLKVQWTTSDDALAEFVDLATSVKMMFVSYKEDEDLRRAVSYQTVSLSDRIGVVTIEAWIEKYDCVTLTSCGQELKEPANFSLRGHLKLLLVPERTLVPPSASILNHPDSQVLFHIEGGSGRFAVKGSSSSIAKVDYKAKSEFLVIPRSEGLLTVSVYDLCLDSTGPAILHVQISDVYGVDVAVVNKIEVYSSETLRLQLLDVLGTPLLLGSLKFLTLTPHFSPDILNIRRNVDVDESSDGNQDTAFFTVRGVSLGTASLTFTASALGKGSATSEPKDIQVFAPLRLDPRVVVLVRGATFQVRSTGGPSPQAATVFNIANQTVATVSSVGLVEAQQIGTTNLTGLVQAADPAKGQTLLFSKDVIFIHVVQLYGVKINVASTNLVTGTKISMYATGLNDETPFTFANAIPGLKFYWSSSNPDVCQVRSVYALSGVAVESENDFRVDLHCINPGQTTVRLRMEIDDQRYQQAHSQALREDDVTFEVYERLQLIFPASGFLLLPNNVNTKIKTNRDGSASITYELITDCSQRHVGFNTPSVVTISKAGHVSTASLSGTAVVLVTVHEEFGINQTAVVHVEVKAVSSLAITCQSPVRANSEKLQTFPLGMNVLFAVTLHDNIGRTFSVATIPLKFDAVHVVPGPENGTFFARAMNLGEAILKVWDPSAANIADYIRIRIGHGLTPTKATLLLGTVQQFSTSVVSEGVGGAWSSSNIRVLDINATTGVAMAMAAGTATIYYKIPGLYSAQTEVKVESLSYIRVEIDDSLVITNLPRADGRGYVIPITLGHDRLPREDTSEVSGQGDGLVLYQGAMPFECIVSSDFDIFGHDNLDQFFDVKAGMISGRPMCYVIPRDQSTDSVRAACTSTGQLMLRVVVMDEIQGGTISSGAVTLPFLPAFVVSVAELELSADRPDDFIVVTGTAKQLNSIEVRTLDHSLVEVISQPPRADTQQEYKIAVAGANLKSFKKVGVEFKSKLTGQREMVYVSYAPPFGSGAVPVIYPGAALSNQQCPPPAATSTDRSFQGLFLALLGQTSAWIIGFSIFIGLLILALVLCCSPRNTSGAQNAGMRSPGPRYDTPYGVTPPYGSPYGQSPSQGSYSAGRGPYSASTYAGYRSPGDASGRSIPEENLDEPRRETFSTYRRTTTSTASRSYLSDNPSQAPGGALSLGRTSPSKSPGLFSVTQ

Uniprot

Uniprot term	Description
Q8TEM1	Nuclear pore membrane glycoprotein 210 OS=Homo sapiens OX=9606 GN=NUP210 PE=1 SV=3
P11654	Nuclear pore membrane glycoprotein 210 OS=Rattus norvegicus OX=10116 GN=Nup210 PE=1 SV=1
Q9QY81	Nuclear pore membrane glycoprotein 210 OS=Mus musculus OX=10090 GN=Nup210 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02368	Big_2	Bacterial Ig-like domain (group 2)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003343	Domain	Bacterial Ig-like domain, group 2	Interproscan
IPR008964	Homologous_superfamily	Invasin/intimin cell-adhesion fragments	Interproscan
IPR045197	Family	Nuclear pore membrane glycoprotein 210-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23019	NUCLEAR PORE MEMBRANE GLYCOPROTEIN GP210-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005643	Cellular Component	nuclear pore	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14314	NUP210, GP210; nuclear pore complex protein Nup210	-	Messenger RNA biogenesis	ko03019	deepkoala