Detailed information of ANN02725-RA in Nanomia septata

Genomic Location: chr1:187836620...187857158
NR annotation: XP_047129940.1, E3 SUMO-protein ligase RanBP2-like [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q7Z3J3RanBP2-like and GRIP domain-containing protein 4 OS=Homo sapiens OX=9606 GN=RGPD4 PE=1 SV=3
A6NKT7RanBP2-like and GRIP domain-containing protein 3 OS=Homo sapiens OX=9606 GN=RGPD3 PE=1 SV=2
P0DJD0RANBP2-like and GRIP domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RGPD1 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|ZnF|NZF

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00638Ran_BP1RanBP1 domainDomainInterproscan
PF00641zf-RanBPZn-finger in Ran binding protein and othersDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036443Homologous_superfamilyZinc finger, RanBP2-type superfamilyInterproscan
IPR001876DomainZinc finger, RanBP2-typeInterproscan
IPR000156DomainRan binding domainInterproscan
IPR045256DomainRan-specific GTPase-activating protein 1, Ran-binding domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR045255FamilyRan binding protein RanBP1-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23138RAN BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046907Biological Processintracellular transportInterproscan
GO:0006913Biological Processnucleocytoplasmic transportInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0005643Cellular Componentnuclear poreInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12172RANBP2, NUP358; E3 SUMO-protein ligase RanBP2EC:2.3.2.-
Ubiquitin systemko04121deepkoala

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