Genomic Location: Scaffold_3__1_contigs__length_63507380:53057901...53062673
NR annotation: CAH3021505.1, unnamed protein product [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families
| CDS |
| ANN02848-RA |
| Transcript |
| ANN02848-RA |
| Protein |
| ANN02848-RA |
| UniProt accession | Description |
|---|---|
| Q15477 | Superkiller complex protein 2 OS=Homo sapiens OX=9606 GN=SKIC2 PE=1 SV=3 |
| Q6NZR5 | Superkiller complex protein 2 OS=Mus musculus OX=10090 GN=Skic2 PE=2 SV=1 |
| F4JAA5 | DExH-box ATP-dependent RNA helicase DExH11 OS=Arabidopsis thaliana OX=3702 GN=SKI2 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001225 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13234 all species → | MTR4_beta-barrel | Mtr4-like, beta-barrel domain | Domain | Interproscan |
| PF08148 all species → | DSHCT | DSHCT (NUC185) domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR025696 all species → | Domain | Exosome RNA helicase MTR4-like, beta-barrel domain | Interproscan |
| IPR050699 all species → | Family | RNA/DNA Helicase | Interproscan |
| IPR012961 all species → | Domain | ATP-dependent RNA helicase Ski2/MTR4, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12131 all species → | ATP-DEPENDENT RNA AND DNA HELICASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003724 all species → | Molecular Function | RNA helicase activity | Interproscan |
| GO:0006401 all species → | Biological Process | RNA catabolic process | Interproscan |
| GO:0055087 all species → | Cellular Component | Ski complex | Interproscan |
| GO:0070478 all species → | Biological Process | nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay | Interproscan |
ANN02848-RA.
