Gene detail

Detailed information of ANN02867-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:53180936...53184305
NR annotation: CAH3114450.1, unnamed protein product [Porites lobata]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7T320	RAB6-interacting golgin OS=Danio rerio OX=7955 GN=gorab PE=2 SV=1
B1H222	RAB6-interacting golgin OS=Rattus norvegicus OX=10116 GN=Gorab PE=2 SV=2
Q8BRM2	RAB6-interacting golgin OS=Mus musculus OX=10090 GN=Gorab PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009002 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04949 all species →	Transcrip_act	Transcriptional activator	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007033 all species →	Family	RAB6-interacting golgin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21470 all species →	RAB6-INTERACTING PROTEIN GORAB	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:1905515 all species →	Biological Process	non-motile cilium assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19748	GORAB, SCYL1BP1; RAB6-interacting golgin	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.