Detailed information of ANN02887-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:53582512...53596383
NR annotation: XP_044172456.1, heterogeneous nuclear ribonucleoprotein A3-like [Acropora millepora]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q32P51Heterogeneous nuclear ribonucleoprotein A1-like 2 OS=Homo sapiens OX=9606 GN=HNRNPA1L2 PE=1 SV=2
P07909Heterogeneous nuclear ribonucleoprotein A1 OS=Drosophila melanogaster OX=7227 GN=Hrb98DE PE=2 SV=1
G5EFS2RNA-binding protein Musashi homolog 1 OS=Caenorhabditis elegans OX=6239 GN=msi-1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000504 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076
all species →
RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504
all species →
DomainRNA recognition motif domainInterproscan
IPR035979
all species →
Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677
all species →
Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48032
all species →
RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan
GO:0003729
all species →
Molecular FunctionmRNA bindingInterproscan
GO:0006417
all species →
Biological Processregulation of translationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN02887-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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