Detailed information of ANN02901-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:53781574...53797029
NR annotation: XP_044185249.1, LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type receptor 1-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P33450Cadherin-related tumor suppressor OS=Drosophila melanogaster OX=7227 GN=ft PE=1 SV=3
Q2PZL6Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV=2
O35161Cadherin EGF LAG seven-pass G-type receptor 1 OS=Mus musculus OX=10090 GN=Celsr1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18861PTP_tmTM proximal of protein tyrosine phosphatase, receptor type JFamilyInterproscan
PF00028CadherinCadherin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041201DomainPTPRJ, transmembrane domainInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR050971FamilyCadherin domain-containing proteinInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24025DESMOGLEIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0005911Cellular Componentcell-cell junctionInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16498PCDHD1; protocadherin delta 1-Cell adhesion moleculesko04515deepkoala

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