Detailed information of ANN03057-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:55831975...55832787
NR annotation: PFX28089.1, Replication protein A 70 kDa DNA-binding subunit C [Stylophora pistillata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000648 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00098
all species →		zf-CCHCZinc knuckleDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR042509
all species →		FamilyZinc finger CCHC domain-containing protein 3Interproscan
IPR001878
all species →		DomainZinc finger, CCHC-typeInterproscan
IPR036875
all species →		Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22639
all species →		GAG-RELATED PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0002218
all species →		Biological Processactivation of innate immune responseInterproscan
GO:0003690
all species →		Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN03057-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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