Detailed information of ANN03062-RA in Nanomia septata

Genomic Location: chr1:207375043...207383442
NR annotation: XP_046841331.1, malate synthase-like [Xenia sp. Carnegie-2017]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P95329Malate synthase OS=Myxococcus xanthus (strain DK1622) OX=246197 GN=mls PE=3 SV=2
Q8T2K9Malate synthase OS=Dictyostelium discoideum OX=44689 GN=masA PE=2 SV=2
P08997Malate synthase A OS=Escherichia coli (strain K12) OX=83333 GN=aceB PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05485THAPTHAP domainDomainInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF01274MS_TIM-barrelMalate synthase, TIM barrel domainDomainInterproscan
PF13613HTH_Tnp_4Helix-turn-helix of DDE superfamily endonucleaseDomainInterproscan
PF20659MS_CMalate synthase, C-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR006252FamilyMalate synthase AInterproscan
IPR046363Homologous_superfamilyMalate synthase, N-terminal and TIM-barrel domainsInterproscan
IPR001465DomainMalate synthase, TIM barrel domainInterproscan
IPR027805DomainTransposase, Helix-turn-helix domainInterproscan
IPR048355DomainMalate synthase, C-terminal domainInterproscan
IPR011076Homologous_superfamilyMalate synthase superfamilyInterproscan
IPR044856Homologous_superfamilyMalate synthase, C-terminal superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42902MALATE SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004474Molecular Functionmalate synthase activityInterproscan
GO:0006097Biological Processglyoxylate cycleInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005782Cellular Componentperoxisomal matrixInterproscan

TOP