Detailed information of ANN03330-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:60693054...60700038
NR annotation: CAH3110093.1, unnamed protein product [Porites lobata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3TQI7Splicing factor C9orf78 homolog OS=Mus musculus OX=10090 PE=1 SV=2
Q9NZ63Splicing factor C9orf78 OS=Homo sapiens OX=9606 GN=C9orf78 PE=1 SV=1
Q5RC87Splicing factor C9orf78 homolog OS=Pongo abelii OX=9601 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008364 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07052
all species →		Hep_59Hepatocellular carcinoma-associated antigen 59FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010756
all species →		FamilyTelomere length and silencing protein 1-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13486
all species →		TELOMERE LENGTH AND SILENCING PROTEIN 1 TLS1 FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000398
all species →		Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005681
all species →		Cellular Componentspliceosomal complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN03330-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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