Detailed information of ANN03336-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:60768204...60786054
NR annotation: XP_020620010.1, transcriptional protein SWT1-like [Orbicella faveolata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9DBQ9Transcriptional protein SWT1 OS=Mus musculus OX=10090 GN=Swt1 PE=2 SV=3
Q5T5J6Transcriptional protein SWT1 OS=Homo sapiens OX=9606 GN=SWT1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004303 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13638
all species →
PIN_4PIN domainDomainInterproscan
PF00397
all species →
WWWW domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036020
all species →
Homologous_superfamilyWW domain superfamilyInterproscan
IPR052626
all species →
FamilySWT1 Transcriptional RegulatorInterproscan
IPR002716
all species →
DomainPIN domainInterproscan
IPR001202
all species →
DomainWW domainInterproscan
IPR029060
all species →
Homologous_superfamilyPIN-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16161
all species →
UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN03336-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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