Gene detail

Detailed information of ANN03338-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:60799181...60799642
NR annotation: CAH3022748.1, unnamed protein product [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9R1Z7	6-pyruvoyl tetrahydrobiopterin synthase OS=Mus musculus OX=10090 GN=Pts PE=1 SV=2
P27213	6-pyruvoyl tetrahydrobiopterin synthase OS=Rattus norvegicus OX=10116 GN=Pts PE=1 SV=1
Q03393	6-pyruvoyl tetrahydrobiopterin synthase OS=Homo sapiens OX=9606 GN=PTS PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009565 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01242 all species →	PTPS	6-pyruvoyl tetrahydropterin synthase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022469 all species →	Active_site	6-pyruvoyl tetrahydropterin synthase, histidine active site	Interproscan
IPR007115 all species →	Family	6-pyruvoyl tetrahydropterin synthase/QueD family	Interproscan
IPR038418 all species →	Homologous_superfamily	6-pyruvoyl tetrahydropterin synthase/QueD superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12589 all species →	PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003874 all species →	Molecular Function	6-pyruvoyltetrahydropterin synthase activity	Interproscan
GO:0006729 all species →	Biological Process	tetrahydrobiopterin biosynthetic process	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01737	queD, ptpS, PTS; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase	EC:4.2.3.12 EC:4.1.2.50	Transfer RNA biogenesis	ko03016	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.