Gene detail

Detailed information of ANN03407-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:62272878...62273626
NR annotation: CAH3041964.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q92356	Synaptobrevin homolog 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=syb1 PE=3 SV=1
Q32L97	Vesicle-associated membrane protein 4 OS=Bos taurus OX=9913 GN=VAMP4 PE=2 SV=1
O75379	Vesicle-associated membrane protein 4 OS=Homo sapiens OX=9606 GN=VAMP4 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00957	Synaptobrevin	Synaptobrevin	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042855	Domain	v-SNARE, coiled-coil homology domain	Interproscan
IPR016444	Family	Synaptobrevin/Vesicle-associated membrane protein	Interproscan
IPR001388	Family	Synaptobrevin-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45701	SYNAPTOBREVIN FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005484	Molecular Function	SNAP receptor activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006906	Biological Process	vesicle fusion	Interproscan
GO:0019905	Molecular Function	syntaxin binding	Interproscan
GO:0031201	Cellular Component	SNARE complex	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016192	Biological Process	vesicle-mediated transport	Interproscan