Detailed information of ANN03420-RA in Leptoseris scabra

Genomic Location: Scaffold_3__1_contigs__length_63507380:62504380...62506881
NR annotation: CAH3037406.1, unnamed protein product [Pocillopora meandrina]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q19791A disintegrin and metalloproteinase with thrombospondin motifs gon-1 OS=Caenorhabditis elegans OX=6239 GN=gon-1 PE=1 SV=3
P57110A disintegrin and metalloproteinase with thrombospondin motifs 8 OS=Mus musculus OX=10090 GN=Adamts8 PE=2 SV=1
Q9UKP5A disintegrin and metalloproteinase with thrombospondin motifs 6 OS=Homo sapiens OX=9606 GN=ADAMTS6 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000019 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00754
all species →		F5_F8_type_CF5/8 type C domainDomainInterproscan
PF00090
all species →		TSP_1Thrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000421
all species →		DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR008979
all species →		Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR000884
all species →		RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036383
all species →		Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR050633
all species →		FamilyNeuropilin/Multicopper Oxidase/Coagulation FactorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46806
all species →		F5/8 TYPE C DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0038023
all species →		Molecular Functionsignaling receptor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN03420-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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