Gene detail

Detailed information of ANN03533-RA in Leptoseris scabra

Genomic Location: Scaffold_5__1_contigs__length_58733080:86988...88715
NR annotation: XP_020603662.1, protein FAM53A-like [Orbicella faveolata]
Species abbreviation LSCAB · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q29RM2	Protein FAM53C OS=Bos taurus OX=9913 GN=FAM53C PE=2 SV=1
Q8BXQ8	Protein FAM53C OS=Mus musculus OX=10090 GN=Fam53c PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005786 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15242 all species →	FAM53	Family of FAM53	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029356 all species →	Family	Family of FAM53	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR28567 all species →	-	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006606 all species →	Biological Process	protein import into nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN03533-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.