Detailed information of ANN03737-RA in Leptoseris scabra

Genomic Location: Scaffold_5__1_contigs__length_58733080:3509437...3539931
NR annotation: CAH3117210.1, unnamed protein product [Porites lobata]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6PCJ1Dynactin subunit 1 OS=Xenopus laevis OX=8355 GN=dctn1 PE=2 SV=1
P35458Dynactin subunit 1 OS=Gallus gallus OX=9031 GN=DCTN1 PE=1 SV=2
Q14203Dynactin subunit 1 OS=Homo sapiens OX=9606 GN=DCTN1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004311 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12455
all species →
DynactinDynein associated protein FamilyInterproscan
PF00078
all species →
RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF01302
all species →
CAP_GLYCAP-Gly domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR022157
all species →
DomainDynein associated proteinInterproscan
IPR000477
all species →
DomainReverse transcriptase domainInterproscan
IPR000938
all species →
DomainCAP Gly-rich domainInterproscan
IPR036859
all species →
Homologous_superfamilyCAP Gly-rich domain superfamilyInterproscan
IPR043502
all species →
Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31635
all species →
REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for ANN03737-RA. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN03737-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP