Gene detail

Detailed information of ANN03762-RA in Montipora grisea

Genomic Location: Scaffold_10__1_contigs__length_71276496:43304963...43307240
NR annotation: XP_020627103.1, uncharacterized protein LOC110064398 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN03762-RA

ATGGAGGCGGAAACCTCTTCGATATGCAATTTAGAGGTAGAAAACTTGAAACCAGAAGATATTCCTGGCACAGTCATTGAAAAAGAAAGTGAGACTGGAAGGTGGACGGTGGAAAAACTTAAGTTTTGGTTGAAATGTAGGCGCCTTAACCAGCAAGGGAATAAAAAACAACTGTTACAGAAAGTGCTGTCTTTTAACGCCATACCGAAATACCGTGATAATGTCTACGATCCAGATCCACAAAAAAGTTACACAAAGGCGAAACTTCAAAGGCATTCGGCAAACAATAAAGAAAACAGGGAAAGTAATTCATCGATTTCTTCAACAGCCGAAAATCCAGAGGATTTGTTCCCGACAGATGAAAAAGCGAATGAACTTTTCAACAATAAATTTTCAGTTCTTCCAAATTTTGTTCCGATGGATGCATTTCAACATGTCAAAACTTCTGGCAAGTCAATAAAGAAGTATGATAATGTCGATGCTGTTGTAAACTCAAACGACAAGGGGCTAGGAATGATGAGCGTTGTCCATGACTTGCAGGTGTACAAGGATCCACAAAGAAGTTATGTCTTTGTGAGAGCCTCTTGTTGGGCCTCGTACAAGAGAGATTGTAAATACAAGGTAAAATTGACTGTACAAGAAAGCAGTACTCACAAAATTAAATCAGTGCCCAGCATCCAAAAGCGAATGTTGCTGTCATGTCATGGCAGTGATTTGGAAACTGGAAGACATGACCAGAAAGGGAGAGTTATAAGACAATGGGGCAAGGGAGGGAAAAGAGAAAATAACTTTTCAGCAGTTATGACTACAAGTATTGTAAAACCAAGGCATGCCTCTGATGGACCAGGCAAAAGAAAAAGGGAGATACATAGTCAATTCTTTGATCCAAGACCGGTGAAATCAAGGAAGATTGACCCTGACTCCATAGTTAAATTAAAGAAAAACCTTCAAGCAATCAATCCAAGAGTTCTGTTTGCTGCAATGCTGCCTGAAGACAGTAATATTCCTACTGTGAACACTTTGATTGGGCCAGTGGGAAGAGGCTCCGTGTTGCACAAGCAGCTTAAAGGATTTCAAATGGCTGGAAATAATCCTTGCACCTCTTCGGATCAAATTTCGAACTGTTTCAATTTCTCCCAGTCACCTAATCAAGTAATGCAGGGAAGTAGAAATGTAGGTGGGCATGGTCCTAGCCAAACAAATTCAAATGCCACTGATAGTCATTTTATTAGCCATTCAGAAGAGTCTACTGACACTCAAACCAGGCAGTTAAATGATAATACACCCATTGCAACTCAGTTTCTAAACAACAGTTCACCTAACCTACATTTAACACATTTCCCACTACTACCCAACAAATGCTGTGAGGAAACTGTTGACTTGAATCTATTTTCTAATGCTCCAAATATCTTGAATGAGGTTCAAGCAGCACAAGAACTCTATGGTAAGACAACTGGTCGAGCGAATAACAGTCTGTGGCGTGAGGAAAGAAAACATCGCATCACAGCATCAAATTTTGGTAAAATTTTGAAGAGAAAGAGTCAGCCAACTCCTGAATTTATCCGAGCCATCTGTGATCCAGTTGATATCAGCAATTTGCCCTTTGTTAAATATGGCAGAGAAAATGAGGACAAAGTTGCAGATATGTATGTGAAAAAAATGCATGAGGAAGGAAACAATGGACTGAGAGTGGCAGAAGTTGGTTTATGTGTCAACCCATCCCTACCTCATCTAAGGGCATCTCTAGATCGTATTGTTTTTGAACCCATGTCAAATGAAAAATATAGAGAACTAGAGATTAAAACTAACCCAAAGACAGGCTCCATGGGTCTCTCAATAGCTGACACTGTTGGTCACCCTTCTTTTGGAGCAAACCATTTTTTGGTTTCAAAAGATGGTCAAATTAAGCTGAACACTGAGCACAGATACTATTATCAACTTCAGGGTCAGCTGGGCCATTCTGTTCTCCCATGGGTTGACTTCACAGAACATTCAGGCATAGGAGACATATTCAAGGAACGAGTATTTCCTGACAAGGAATTGCGGTCAAAAATTATGGTTCCTAAATTGAATCCATTCTTTTTCAATCATGCACTGGTTTTTTTCTTGTTGAATGAACCTAAAACATGTTAA

Transcript

ANN03762-RA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09588	YqaJ	YqaJ-like viral recombinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011604	Homologous_superfamily	PD-(D/E)XK endonuclease-like domain superfamily	Interproscan
IPR051703	Family	NF-kappa-B Signaling Regulator	Interproscan
IPR011335	Homologous_superfamily	Restriction endonuclease type II-like	Interproscan
IPR019080	Domain	YqaJ viral recombinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46609	EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23697	SHB_D_E_F; SH2 domain-containing adapter protein B/D/E/F	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala