Gene detail

Detailed information of ANN03772-RA in Leptoseris scabra

Genomic Location: Scaffold_5__1_contigs__length_58733080:4061903...4074920
NR annotation: CAH3016486.1, unnamed protein product, partial [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN03772-RA

ATGTCGGACTCTAGCTGGTATCATAACAGAACTAAACGCCTGACTTCACATGATTTTTATGAGCATGGAGCCGATTCGCATTATCATTATGGAATAGTTATTGACTGTGGAAGCAGCGGATCTCGAGTTTTTATTTATTACTGGCCACCGCACAATGGAAATCCAGACGAGTTGCTTCAAATTAAGCAAATGAAAGATTCAAGGGGAAACCCAGTCAGGATGAAGATCAAACCAGGAATATCCAGTCTTGTTGAGCGGCCAACACAAGCTTCATCTTACATTGAACCTCTTCTGGACTTTGCTGCTCAACAGATTCCAGAACACAAACACCTGGAGACACCACTTTATATCCTAGCAACAGCTGGGATGCGAATGCTTTCTCCTGCAAACCAAGAAGCTATTCTAGATGACATAAGAGTGGATATTCCTTTAAAATATAACTTCCATTTCATGTCCTCACATGTTGAAGTTATCACCGGGAAACAAGAAGGGATTTATTCATGGATTGGAGTTAATTTTGAGCTGGGAAGATTTGATCATTCACATGACACAAAAGGTTCACCAAGCTTGAATAGCAGCATATCTGAAGTGTATCGTAAAAGTACTGTGGGTGCCTTGGATATGGGCGGAGGCTCTGCTCAGATTGCTTTTGAGGTTGGAAAATCTGTGTGGGTTCCAGCAGAGCTGAGTGCACAAGTGAACCTGGGATGTGACTCTCATCAAACGATCCATAACTACAATCTGTATGTTGCAACATTTCTTGGCTTTGGTGGTAATGCTGCGCGGAACAGGTACACAGAGCTCGTCATCACCCAGAATAAAACTCTGGACATTGATGTTTCCACAGGAGCTTATCTCGATCCTTGTTTGCCAAGTGAATGCACTGAACATGGAACATATAAAGGAAAGGAATACCAATTTTTAGGAACAGGGGAATATAATGAATGTCAAAAGCTTGTTCTTCCACTTCTCAACCTCACCAAGCCTTGTCCAAAGCACCCATGTTCATTTGATGGAATCTATCAACCTATCATGGATTACAGAGAGGTTGAATTTTATGGCTTCTCTGAATACTGGTACTCCATGCATGATGTGCTGAGAATTGGGGGACAGTACAGTGCAAGTAAAATGAAGCAAGCTGTGGAGGAGTTCTGCCGAACCCGTTGGCCTGTTCTTGTGTCACGGCATGCTAAAGGACTCTACCCATTTGCAGACAGTCATAGACTCAAGTTTCAGTGTTTCAAAGCAGCCTGGATGACAACCGTTCTTCACCAAGGTTTCAAATTTCCCCAAAACTACACCAAACTGCGATCTGCCTATTATATAGGTGGAAAAGAAGTTCAGTGGACTCTAGGGGCTATCCTGTATCGCACAAGATTTCTTCCCCTGAGGTATGTGAACGATAAACCTACAACCCTGGCAACAAGCAGAAATTTATATAAGGGCCAAAAGGGAGAGCGTGGTTCGCCAGGAAAAAAACCGGATGGTGCGATACAGTTTAGCGATACTGCTGACAAATGCATCCCTCGTATCGCAGGCACTGTCCGTTACAGCGCTTCCCAGAAAACCTTGCTGCTCTGCGATGGAAGTGCTTGGCTGCCGCTGTTGGCTGCTGGGAAAGGCTACGTGGCTTCTAAACCAGGCCGCCACTGTCTGGACATTTTAAATTCAGGCCAAAGCCGCGGTAATGGTCTTTACTGGATTGATCCAAACGGTGGCTCCACAGATGACTCGTTCCAAGCTTTCTGCGACATGGAAACCGAGCGAGGAGGTTGGACTCTAGTAGCCACAAAGGTCTCCCCGAGCTTCCTCTTCATCAAATCTGCATTCTCAACAGTGGCCGCGAAAACAAAGCACTCGGATGCCGCGAGTCATATCCACCCTAGCATGGGGGACTGGGAAGAGGTTATGTTCCGCTTTGCTGACGTCAGTACCATCCGGGTTATTTATAAAAGAAACGCAGGCGCACTAAACACAAATAAGAAAGAATTTCACAAGTTCCTAATGGGCAGGTCTCTTCAGCTGAGAAAGAACGTGTTTGGCTTTTACAAATACAGCCCAGCAGATCACAAGAGAAGTCCCACCGGGGGGTTTGTCACGATAAACGGACTTCACTTCAATTCAAACCATGGAATTTCAGAAGGCCACGAATCGTCAGACAAGTGGCTTGACATGTGGAATCATGTTGATCGTCAGGGAAACAACTACATCTACTCGGATGACAGAAGGGCGCTTGGCACCAAATGTATTGCGGGCTACTGTTATCTGAACAAGCCAATCTGGGTGATGGTGCGCTAA

Transcript

ANN03772-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9Y227	Ectonucleoside triphosphate diphosphohydrolase 4 OS=Homo sapiens OX=9606 GN=ENTPD4 PE=1 SV=1
Q9DBT4	Ectonucleoside triphosphate diphosphohydrolase 4 OS=Mus musculus OX=10090 GN=Entpd4 PE=1 SV=1
Q3TCT4	Ectonucleoside triphosphate diphosphohydrolase 7 OS=Mus musculus OX=10090 GN=Entpd7 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006584 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01410 all species →	COLFI	Fibrillar collagen C-terminal domain	Family	Interproscan
PF01150 all species →	GDA1_CD39	GDA1/CD39 (nucleoside phosphatase) family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000407 all species →	Family	Nucleoside phosphatase GDA1/CD39	Interproscan
IPR000885 all species →	Domain	Fibrillar collagen, C-terminal	Interproscan
IPR036056 all species →	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR002181 all species →	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11782 all species →	ADENOSINE/GUANOSINE DIPHOSPHATASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004382 all species →	Molecular Function	GDP phosphatase activity	Interproscan
GO:0005794 all species →	Cellular Component	Golgi apparatus	Interproscan
GO:0006256 all species →	Biological Process	UDP catabolic process	Interproscan
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan
GO:0045134 all species →	Molecular Function	UDP phosphatase activity	Interproscan
GO:0005201 all species →	Molecular Function	extracellular matrix structural constituent	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN03772-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.