Genomic Location: Scaffold_10__1_contigs__length_71276496:48739061...48767850
NR annotation: XP_029188126.2, uncharacterized protein LOC114955454 [Acropora millepora]
| CDS | ||||
| ANN03881-RA | ||||
| Transcript |
| ANN03881-RA |
| Protein |
| ANN03881-RA |
| Uniprot term | Description |
|---|---|
| Q4V8I4 | Differentially expressed in FDCP 8 homolog OS=Rattus norvegicus OX=10116 GN=Def8 PE=1 SV=1 |
| Q6ZN54 | Differentially expressed in FDCP 8 homolog OS=Homo sapiens OX=9606 GN=DEF8 PE=1 SV=2 |
| Q99J78 | Differentially expressed in FDCP 8 OS=Mus musculus OX=10090 GN=Def8 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13901 | RH_dom | Rubicon Homology Domain | Domain | Interproscan |
| PF00665 | rve | Integrase core domain | Domain | Interproscan |
| PF17919 | RT_RNaseH_2 | RNase H-like domain found in reverse transcriptase | Domain | Interproscan |
| PF17921 | Integrase_H2C2 | Integrase zinc binding domain | Domain | Interproscan |
| PF02759 | RUN | RUN domain | Family | Interproscan |
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR025258 | Domain | Rubicon Homology Domain | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR047983 | Domain | Differentially expressed in FDCP 8, C conserved region 1 | Interproscan |
| IPR001584 | Domain | Integrase, catalytic core | Interproscan |
| IPR043128 | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| IPR004012 | Domain | RUN domain | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR046349 | Homologous_superfamily | C1-like domain superfamily | Interproscan |
| IPR002219 | Domain | Protein kinase C-like, phorbol ester/diacylglycerol-binding domain | Interproscan |
| IPR041577 | Domain | Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain | Interproscan |
| IPR041588 | Domain | Integrase zinc-binding domain | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR037213 | Homologous_superfamily | RUN domain superfamily | Interproscan |
| IPR050951 | Family | Retrovirus-related Pol polyprotein | Interproscan |
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR37984 | PROTEIN CBG26694 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0015074 | Biological Process | DNA integration | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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