Detailed information of ANN03901-RA in Leptoseris scabra

Genomic Location: Scaffold_5__1_contigs__length_58733080:6248297...6303263
NR annotation: XP_044169270.1, LOW QUALITY PROTEIN: huntingtin-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P42859Huntingtin OS=Mus musculus OX=10090 GN=Htt PE=1 SV=2
P42858Huntingtin OS=Homo sapiens OX=9606 GN=HTT PE=1 SV=2
P51111Huntingtin OS=Rattus norvegicus OX=10116 GN=Htt PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20926Htt_N-HEAT_1Huntingtin, N-terminal HEAT 1RepeatInterproscan
PF12372Htt_N-HEATHuntingtin, N-terminal HEATRepeatInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF20927Htt_C-HEATHuntingtin, C-terminal HEATRepeatInterproscan
PF20925Htt_bridgeHuntingtin, bridgeRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011010Homologous_superfamilyDNA breaking-rejoining enzyme, catalytic coreInterproscan
IPR028426FamilyHuntingtin familyInterproscan
IPR048411RepeatHuntingtin, N-terminal, HEAT repeats 1Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR024613RepeatHuntingtin, N-terminal, HEAT repeats 2Interproscan
IPR010998Homologous_superfamilyIntegrase/recombinase, N-terminalInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000091FamilyHuntingtinInterproscan
IPR013762Homologous_superfamilyIntegrase-like, catalytic domain superfamilyInterproscan
IPR048413RepeatHuntingtin, C-terminal HEAT repeatsInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR048412RepeatHuntingtin, bridgeInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10170HUNTINGTON DISEASE PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

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