Detailed information of ANN03906-RA in Leptoseris scabra

Genomic Location: Scaffold_5__1_contigs__length_58733080:6365885...6376059
NR annotation: XP_044166390.1, uncharacterized protein LOC122950403 [Acropora millepora]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9P2W9Syntaxin-18 OS=Homo sapiens OX=9606 GN=STX18 PE=1 SV=1
Q5REB4Syntaxin-18 OS=Pongo abelii OX=9601 GN=STX18 PE=2 SV=1
Q8VDS8Syntaxin-18 OS=Mus musculus OX=10090 GN=Stx18 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000049 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10496
all species →
Syntaxin-18_NSNARE-complex protein Syntaxin-18 N-terminus DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000727
all species →
DomainTarget SNARE coiled-coil homology domainInterproscan
IPR019529
all species →
DomainSNARE-complex protein Syntaxin-18, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15959
all species →
SYNTAXIN-18Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005783
all species →
Cellular Componentendoplasmic reticulumInterproscan
GO:0006890
all species →
Biological Processretrograde vesicle-mediated transport, Golgi to endoplasmic reticulumInterproscan
GO:0031201
all species →
Cellular ComponentSNARE complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN03906-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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