Gene detail

Detailed information of ANN04008-RA in Montipora grisea

Genomic Location: Scaffold_10__1_contigs__length_71276496:54040373...54042202
NR annotation: KXJ19612.1, Transposon Ty3-G Gag-Pol polyprotein [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q8I7P9	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF00385	Chromo	Chromo (CHRromatin Organisation MOdifier) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052160	Family	Gypsy Retrotransposon Integrase-like	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR000953	Domain	Chromo/chromo shadow domain	Interproscan
IPR016197	Homologous_superfamily	Chromo-like domain superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR023780	Domain	Chromo domain	Interproscan
IPR023779	Conserved_site	Chromo domain, conserved site	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47266	ENDONUCLEASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan