Gene detail

Detailed information of ANN04417-RA in Leptoseris scabra

Genomic Location: Scaffold_5__1_contigs__length_58733080:17767135...17778968
NR annotation: KAJ7390728.1, hypothetical protein OS493_022809 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A0A481NSZ4	Bactericidal permeability-increasing protein OS=Sebastes schlegelii OX=214486 GN=BPI PE=1 SV=1
P18428	Lipopolysaccharide-binding protein OS=Homo sapiens OX=9606 GN=LBP PE=1 SV=3
P17453	Bactericidal permeability-increasing protein OS=Bos taurus OX=9913 GN=BPI PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02886	LBP_BPI_CETP_C	LBP / BPI / CETP family, C-terminal domain	Domain	Interproscan
PF01273	LBP_BPI_CETP	LBP / BPI / CETP family, N-terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001124	Domain	Lipid-binding serum glycoprotein, C-terminal	Interproscan
IPR017943	Homologous_superfamily	Bactericidal permeability-increasing protein, alpha/beta domain superfamily	Interproscan
IPR017942	Domain	Lipid-binding serum glycoprotein, N-terminal	Interproscan
IPR032942	Family	BPI/LBP/Plunc family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10504	BACTERICIDAL PERMEABILITY-INCREASING BPI PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008289	Molecular Function	lipid binding	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan