Gene detail

Detailed information of ANN04502-RA in Leptoseris scabra

Genomic Location: Scaffold_5__1_contigs__length_58733080:18820372...18821408
NR annotation: KAJ7373225.1, hypothetical protein OS493_012812 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q99PD2	E3 ubiquitin-protein ligase RNF138 OS=Rattus norvegicus OX=10116 GN=Rnf138 PE=2 SV=1
Q32LN5	E3 ubiquitin-protein ligase RNF138 OS=Bos taurus OX=9913 GN=RNF138 PE=2 SV=1
Q9CQE0	E3 ubiquitin-protein ligase RNF138 OS=Mus musculus OX=10090 GN=Rnf138 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13923	zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR051657	Family	RNF168/RNF169 E3 ubiquitin-protein ligase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23328	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006302	Biological Process	double-strand break repair	Interproscan
GO:0031491	Molecular Function	nucleosome binding	Interproscan
GO:0035861	Cellular Component	site of double-strand break	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18492	ISL2; insulin gene enhancer protein ISL-2	-	Transcription factors	ko03000	deepkoala