Gene detail

Detailed information of ANN04526-RA in Leptoseris scabra

Genomic Location: Scaffold_5__1_contigs__length_58733080:19217277...19230056
NR annotation: CAH3028899.1, unnamed protein product [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5ZL36	Protrudin OS=Gallus gallus OX=9031 GN=ZFYVE27 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005206 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01363 all species →	FYVE	FYVE zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011011 all species →	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR017455 all species →	Domain	Zinc finger, FYVE-related	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR042405 all species →	Family	Protrudin	Interproscan
IPR000306 all species →	Domain	FYVE zinc finger	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14543 all species →	PROTRUDIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0043621 all species →	Molecular Function	obsolete protein self-association	Interproscan
GO:0071782 all species →	Cellular Component	endoplasmic reticulum tubular network	Interproscan
GO:0071787 all species →	Biological Process	endoplasmic reticulum tubular network formation	Interproscan
GO:0072659 all species →	Biological Process	protein localization to plasma membrane	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19368	ZFYVE27; protrudin	-	Endocytosis	ko04144	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.