Gene detail

Detailed information of ANN04723-RA in Leptoseris scabra

Genomic Location: Scaffold_5__1_contigs__length_58733080:23224727...23235627
NR annotation: CAH3178163.1, unnamed protein product [Porites lobata]
Species abbreviation LSCAB · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN04723-RA

ATGGCGGCTACGAGGTTGTCTTTATTAGTGCTTGGAATATTAGTCCATGTGGTCTATTTAGCCTCCATATTTGATATCTATTTCACCTCTCCTCTTGTTCATGGCATGACGCCTTATAAATCAAATCTTAAACCGCCAGCAAAGAGGCTGGTCTTGTTCGTTGCTGATGGTTTGAGAGCGGACAAGTTTTTTGAAGTTGATGACGGAAAGACTCGTGTGCCATATCTAAGAGGTTTGATGGAGAAGAAAGGCACTTGGGGTGTGTCTCACACTAGAGTTCCTACTGAGTCTCGCCCAGGACATGTTGCTCTTGTTGCTGGGTTTTATGAGGATGTGAGCGCAGTTGCTAAAGGCTGGAAAGAAAACCCAGTAGAGTTTGATTCCACTTTCAACGAAAGCCGTTTCACATGGGCATGGGGAAGCCCTGACATATTACCAATGTTTGCAAAGGGAGCCAGTGGGGACCATGTATTCACGTCCATGTACAAAGATGTTGCAGAGGACTTTGCAGATGAAGATGCTTCTAAACTTGATACTTGGGTGTTTGATAAAGTGCAAGAGTTCTTTGCTTCTGCTAAGAATAATGAGACTTTGAAGCAGATGCTTTCTCAAGACCAAATTGTTTTTTTTCTTCACCTCCTTGGTAAGCTCTTCAAAACTGCTCCAGTCTTGAGTATATCATTGTCTGATAAAAATTTTATCATGTCGTTCCACTCACAAGATGGGGTAGGGAAGGTTTCCAAGAATAGAGATGGTCCCAAAATCGCTGTGAAAACCAAACCCTCTCGTAACTTTTGTTGCTGGCAGACTGTCTGTTATGCTGGAATCGACACCAATGGCCACGCCCACAGACCTACGTCACAAGAATATCTGAAAAATATTGCTGTTGTTGACAAAGGGATTCAAGAAATGGAAAAACTCGTTGAGGATTTTTACAACCATGATGGTCAAACAGCGTATGTAATGACAGCTGATCATGGTATGACGAACTGGGGATCCCATGGGGCAGGTCATCCTCATGAGACACTGACCCCATTAATGGCCTGGGGAGCTGGTGTGCAGAGTCCCTTGGCTCCAGAACACGGCGTGGATGTCCCAGCTGAGATGTACAAGTGGAAACTGGCTCATCTGAGAAGAGTTGATGTTAATCAAGCTGATATTGCACCTCTGATGACATCTCTGATTGGTGTCCCATTTCCTCTGAACTCTGTGGGTGTTTTACCAGTGGAGTACCTGAATAACACAGAGGAGTACATCGCAGAAAACCTGTTCATGAATGCACAACAGATTCTTGCTCAGTATGAGGTGAAAGAACTGTTCAGGAAAGAGACGTCTCTGTTGTTTCGTCCATTCACCTTGTTGGCAGGTGCTAAGAAAACAGGAATGATTCGTGACATAAAGGACTTTCTACGAACCAATAAGTACAGAGAAGCAGTTTACCACAGCAGAGAACTTATAGAGCTTGCGTTAAAAGGGCTTAATTATTATCAAAACTACGATCGAATTTTCTTGAATTTGGTTGTTACTCTTGGGTTTCTGGGCTGGATATTCTGTATCATAATACAGATTTTTGAAGATCACAGTAACGTCCTGAAAGAAACGTCCCAAATAAACCGGAAACGCAGAGATCCTTTGGTAAAAGCATCGTATGTGGACAGCACATCTCTAGTGTTAGCCATTCTGGTTATTATACTGTTGCTAATCCAGAAGGCTCCGTGGATGTATTACAGCTATTGTTTGTTGCCGTTGGTGTTTTGGAACCGCATCGGAAAGAGACTTCACATAATTCACGCCGCACTGGATTACATCCGTTTGAAGAAATTGCAGCGAAGAGTAACATTTACAGTGTTGTTTGGCGCATTCTCCTTGGAGATTCTTGTTCTGAGTTTCTTTATGCGTGAGATTCTCTCGGTTGGTTTGTTATGTCTGGCTGTTTGGCCTCTTACCACAACACTTTTGTCAAACTGCAAGCCATTTCTGGCGTGTTGGATGGTACTCACCTTTTCTCTCTCTGTTTTCCCTATCCTTCCAGTGGTTGGACGTGAAGCAAATTACCTCATAGTATCTGCAGCAGGAATATTGACTGTAGTCTCGTTTACTTTTATGTTGCTTTATTTCTCCAGTATTTCGCATCTGCTCAAGACAGAAATAACTAAATCTTGGAAAATCCTCCTACCTCAATTTGTGCTTGTGGTCTTCGCCGTGTACATTGTTAACAGTACAGCGTCCAGTCTACAGCTAAAACTAGGTCTCCCTCTCGTTAATCAGATTGGAAGCTGGACGATTCTTCTTTCATCGTTTTTGCTTCCGCTTATCAACTCCATCAATTTACCCATCAGAATGTCGAGTATCTCCATTGGTTTTTCCTCTGTTTATTTTCTTCTGAGCACTGCTCATGAAGGCCTGTTTTTGCTTGTTTTCTCGCTTCTCATGGGTGCGTGGTTATTGTGCGAGCACAAACTGTCCGGTAAAACATTGAATACACTGTTAGAAACACAACTGAGTAGTGAAAACCCTACAGCGACACATCAACCAGCCTGGAAGGTTCTCACAGAAGGCCTCAACGCACCGCTTGTTAGGAAGCTTACTTTGCAAGATCTGCGCTGCGCTTATTTCTTCGTCTTCTTTATAATTGTAGCTTTCTTTGGAACAGGAAACATTGCAAGCATCAACAGCTTTGATCCGGCGTCGGTGTACTGCTTTCTGACGGTGTTTTCACCGTTCGTGATGGGTAGTTTACTCTTGTGTAAGGTTCTTATTCCATTTGTGATTGTAGCATGCGCATTTGATGCCATACACGTAGTATTGTCGGTCCCAGTTCAGAGTCTTGTGCTGGTTGTCTTGGTTATGACTGATTTCATGGGCTTGCATTTCTTCTACCTCGTGCAGGATTCCGGCAGTTGGCTTGATATTGGAACGAGTATCAGTCATTTCGTGATTATGATGGCATTCATCATATTTCTGCTTCCTATATTTGGATTAGCAAGACTCTTTACTGGGGCCTCTCTATCGCTACGGACAAGCAAGAAAGTTGCTTAA

Transcript

ANN04723-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O95427	GPI ethanolamine phosphate transferase 1 OS=Homo sapiens OX=9606 GN=PIGN PE=1 SV=1
Q9R1S3	GPI ethanolamine phosphate transferase 1 OS=Mus musculus OX=10090 GN=Pign PE=1 SV=2
Q2U0S9	GPI ethanolamine phosphate transferase 1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=mcd4 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007602 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04987 all species →	PigN	Phosphatidylinositolglycan class N (PIG-N)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017850 all species →	Homologous_superfamily	Alkaline-phosphatase-like, core domain superfamily	Interproscan
IPR017852 all species →	Domain	GPI ethanolamine phosphate transferase 1, C-terminal	Interproscan
IPR037671 all species →	Domain	GPI ethanolamine phosphate transferase 1, N-terminal	Interproscan
IPR007070 all species →	Family	GPI ethanolamine phosphate transferase 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12250 all species →	PHOSPHATIDYLINOSITOL GLYCAN, CLASS N	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0006506 all species →	Biological Process	GPI anchor biosynthetic process	Interproscan
GO:0016740 all species →	Molecular Function	transferase activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0051377 all species →	Molecular Function	mannose-ethanolamine phosphotransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05285	PIGN; GPI ethanolamine phosphate transferase 1	EC:2.7.-.-	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	ko00563	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.