Gene detail

Detailed information of ANN04873-RA in Nanomia septata

Genomic Location: chr2:52398718...52399137
NR annotation: ADD24051.1, S-phase kinase-associated protein 1 [Lepeophtheirus salmonis]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
G5ECU1	Skp1-related protein OS=Caenorhabditis elegans OX=6239 GN=skr-1 PE=1 SV=1
D4ARL8	E3 ubiquitin ligase complex SCF subunit sconC OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=sconC PE=3 SV=1
B6QGB9	E3 ubiquitin ligase complex SCF subunit sconC OS=Talaromyces marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333) OX=441960 GN=sconC PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03931	Skp1_POZ	Skp1 family, tetramerisation domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036296	Homologous_superfamily	SKP1-like, dimerisation domain superfamily	Interproscan
IPR011333	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR016897	Family	S-phase kinase-associated protein 1	Interproscan
IPR001232	Family	S-phase kinase-associated protein 1-like	Interproscan
IPR016073	Domain	SKP1 component, POZ domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11165	SKP1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006511	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0031146	Biological Process	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	Interproscan
GO:0097602	Molecular Function	cullin family protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03094	SKP1, CBF3D; S-phase kinase-associated protein 1	-	Chromosome and associated proteins	ko03036	deepkoala