Detailed information of ANN05235-RA in Leptoseris scabra

Genomic Location: Scaffold_5__1_contigs__length_58733080:28891756...28901077
NR annotation: XP_020619166.1, uncharacterized protein LOC110056945 isoform X2 [Orbicella faveolata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q54TU5Superoxide dismutase [Cu-Zn] 4 OS=Dictyostelium discoideum OX=44689 GN=sodD PE=2 SV=1
O22373Superoxide dismutase [Cu-Zn] OS=Capsicum annuum OX=4072 GN=SODCC PE=2 SV=1
P13926Superoxide dismutase [Cu-Zn] A OS=Xenopus laevis OX=8355 GN=sod1-a PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001583 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00080
all species →
Sod_CuCopper/zinc superoxide dismutase (SODC)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036423
all species →
Homologous_superfamilySuperoxide dismutase-like, copper/zinc binding domain superfamilyInterproscan
IPR001424
all species →
DomainSuperoxide dismutase, copper/zinc binding domainInterproscan
IPR053257
all species →
FamilyCu-only superoxide dismutaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20910
all species →
AGAP001623-PAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006801
all species →
Biological Processsuperoxide metabolic processInterproscan
GO:0046872
all species →
Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN05235-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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