Detailed information of ANN05436-RA in Leptoseris scabra

Genomic Location: Scaffold_5__1_contigs__length_58733080:31674569...31683470
NR annotation: XP_020616592.1, LOW QUALITY PROTEIN: transportin-3-like [Orbicella faveolata]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6P2B1Transportin-3 OS=Mus musculus OX=10090 GN=Tnpo3 PE=1 SV=1
Q9Y5L0Transportin-3 OS=Homo sapiens OX=9606 GN=TNPO3 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006302 (this species only)

 Pfam domain
No Pfam domain signature was detected for ANN05436-RA. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR051345
all species →		FamilyImportin beta-like nuclear transport receptorsInterproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR011989
all species →		Homologous_superfamilyArmadillo-like helicalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12363
all species →		TRANSPORTIN 3 AND IMPORTIN 13Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006606
all species →		Biological Processprotein import into nucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN05436-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP