Gene detail

Detailed information of ANN05480-RA in Leptoseris scabra

Genomic Location: Scaffold_5__1_contigs__length_58733080:32446260...32466978
NR annotation: RMX41118.1, hypothetical protein pdam_00003225 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN05480-RA

ATGTTTGACATTTTGAAGAAATGTGAGCCACAGCAAAACGACAGAATGGAACGCATTAGTATTCATATCGATCTAGTGGAGTCAGCTCTCGCTCACCGCCAATTTCTACAACTTGTTGATGAACACCCAAGTCTGTATGCTGGTCCCCATGTTCAAAACGCAATTAGGAGGTATGAGCTCTTCTGGCTACCAATGCTTGCTCAGACCTCTACTGTGGATCTTGCAGCGCCCCTCGACATTGCTTGGGTCTGGCATGTGCACATGCTGTCACCCCTCAGCTATGAAAGGGACTGTAATAGAGTTGTCTCCACTATAGTGGACCATAGAATACTTGTAGGAGAGAGGCGCGAGAAAGGGCTCAGAAGGGCAAAGGTGTTATGGAGCGAGATGTATCCCGAGGAACCTTTTGAAGTTGACTTGAAGACCCCCGTCACCGAAGGGGCATTCTTCAATTCAAGAATCCATTATGACATTGCTAAGGCTTGCTCTCGACAAAGAGGATTTTATTATCAAGTTTCCTTACCTCATTACGGAGATAAGAAGTTTCTACAAAAAGCAGCTGAAAGGTACCAAAAACATCTGCTGCTTAAACAAAAACACCAGGAGGCGTTTCTCGTACCCTGTTACGACTTTGACCTCATCTGGCACGCGCATCAGGTCCACCCGCTGATTTACAGGAATGACACTATCAGAGTGCTGGGAAAGGTTTTAAAGCACGATGACTCTGTGAACGATCGCCAACCGGGTTCAAAACTTACAATCTCGGATAAGAGCACGCGGGAAACGTGGACACATTCTGGGGAGAAATTTGAGGTAAACGGAGCCATGTTTCGTGGGGAACCTCAGCTCAATGCACGTCACGAGATGGTTGATTACTCTTCGATGGCGGTACTTCAATACAACGTGGAATTTATTCGCGTAGAGGTTGAAGGTCTTCCAAAGCCTAAATTGTATACAGTCAAAATAGATGTTGTCAACGGTAACAGAGTTATAAAGAAGCAAGTTAAAGGGCCGGCCGCCAGGGTGCTTCATCCACCAGACGTTCTGCCTACGTTCACGTTTAACACAAGAAAGAACAAGGCACTCAAGGTTCGTATTTATCGGAAGAAAGCTTGCTCCTGCCTCACACAGTCTTTTGACGAGACTCGTGTCTACTATTTTTTGGACTACCTCAATAAAGTCCCTTACGGAAGCAATGAGAGGCTCGAACCAGTGACGCACGAATTATGGATTACAAGGCAACAGAACATCAGGTTTACTACCCTGGCTTACCCACCTACCCTAGAGGGCTACTTCTTCATCGTAAAACCAGTGACGACTTTCAGTCGTGTTGAGGCAATCGGCGAGATCTTAAGTTCTCCAACGTTAATGCTTCCACCAGCCTCGCTTGCTCGATCTTCAACTGCTCTTTGCGAAATGTCAGTGCATCGGTTGTTCGACTGTAGAGGAGACGCGTTTGCCTGTCGAGTGATGCACTCAGCAGTATTGCAGTTCTCTTCTGTTGAGGTTATTAACAAGGTTGGAAATGTTGTGGGCACGGCACATCTTATTGGCAGTCAGATTCTTCCACAGCCTGAACAAGTCTGCGAGCCAGAAAAATGCTGCACTTTAAATGACCAGGACGGAGAAAGAGCACTTCTCATTAGAGGAAGCAAAGACTGGGGAATCTGCATCGGGAAATGGGACGGATTCGTCAAAAGTGTTCCTGGTATCCCAGGCATAAACGGTGAACCAGGTAAACCAGGTACGAAGGGAACGCCAGGAATAAAGGGCCAGCCTGGAAGTCTGTCCATCAAGTTCTTCTCACTCTCTGGAACGCAAGGATGGAAAGAAGTTAAGAAATCTGGAGACCAGTTTTCCATTGCTCTTCTGGGGAATAGTACGAAGCTTGACGTTAACCTCAAAACGGGAGAGATATCATTTCCACCAGAGGTGAAAGACGTACCAGAAGCAATTGCACTTGGATTTGCTGTTGCCATTCTGCACCTTCTTTGTCAACCTCACAACACGGCAGACGAGAGAGACTACATGGTACCATCGGCCGGGAAAACAGCGCAGAGCAACAAACCACGTAGAATTGACAACGAAGACCTAACACTTGTTTTGGCGGCTGGTTACCATTCCACCACAGTACCGACTAACTGTTACATGAAGTACAGCGTTGGAGGTGGAGCTTGCGGTGGTTGTGGTGGGTGTGGGGGATGCGGTGGTTGTGGAGGGTGTGGAGGGTGTGGAGGGTGTGGCGGCTGTGGGGGATGTGGATGTGGAGGGTGCGGTGAATTTGGGGAGTGTGGCAGTTGTGGCGGTTGTGGAGGTTCGTGCTCTTCCTCGTCGCATGGAATCACTAGACCATTTAAGGCCGCAAGTCCAATTCTCATAAGCAAATGTGAACCACAGCAAAACGACAGAATGGAAGGCATTAATATTGATATCGATCTAGTGGAGTCAGCTCTCGCTCACCGCCAGTTTCTACAACTTGTTGATGAACACCCAAGTCTGTATGCTGGTCCCCATGTTCAAAACGCAATTAGGAGGTATGAGCTCTTCTGGCTACCAATGCTTGCTCAGACCTCTACTGTGGATCTTGCAGCGCCCCTCGACATTGCTTGGGTCTGGCATGTGCACATGCTGTCACCACTCAGTTATGAAGAGGACTGCAATAGGGTTGTCTCCACTATAGTGGATAATAGAATACTTGTAGGAGAGAGGCGCGAGAAAGGGCTCAGAAGGGCAAAAGTGTTATGGAGCGAGATGTATCCCGAGGAACCTTTTGAAGTTGACTTGAAGACCCCCGTCACCGAAGAGGCATTCTTCAATTCAAGAATCCATTATGACATTGCTAAGGCTTGCTCTCGACAAAGAGTATTTTATTATCAAGTTTCCTTGCCTCATTACGGAGATAAGAAGTTTCTACAAAAAGCAGCTAAAAGGTACCAGCAACATCTGCTGCTTAAACAAAAACACCTGGAGGCGTTTCTCGTACCCTGTTACGACTTTGACCTCATCTGGCACGCGCATCAGGTCCACCCGCTGATTTACAGGAATGACACTATCAGAGTTCTGGGAAAGGTTTTAAAGCACGATGACTCTGTGAACGATCGCCAACCGGGCTCAAAACTTACAATCTCGGACAAGAGCACGCGGGAAACGTGGACACATTCTGGGGAGAAATTTGAGGTAAACGGAGCCATGTTTCGTGGGGAACCTCCGTTCAATGCACATCACGAGATGATTGATTACTCCTCAATGGCGGCACTTCAATACACCGTGGAATTGCTTCGCGTAGAGGTTGATGGTCTTCCAAAGCCTAAATTGTATACAGTCAAAATAGATGTTGTCAACGGAAACAGAGTTATAAAGAAGCAAGTTAAAGGGCCGGCCGCCAGGGTGCTTCATCCACCAGACGTTCTGCCTACGTTCACGTTTAACACAAGAAAGAACAAGGCACTCAAGGTTCGCATTTATCGGAAGAAAGCTTGCTCCTGCTTCACACAGTCTTTTGACGAGGCTCGTGACTACTATTTTTTGGACTACCTCAACAAAGTCCCTAACGGAAGCAACAAGAAGCTCGAACCAGTGACGCACGAATTATGGATTACAAGACAACAGAACATCAGGTTTACTACCCTGGCTTACCCACCTACCCTAGAGGGCTACTTCTTTATCGTAAAACTAGAAACGATTTTCAGTCGTGTTGAAGAACCCGGTGAGATCTTAAGTTCTCCAACGTTAATGCTTCCACCAGCCTCGCTTGCTCGATCTTCAACTGCGCTTTGCGAAATGTCAGTGCATCGGTTGTTCAACCGGAGAGGAGAAGCGTTTGCCTGTCGAGTGATGCACTCAGCAGTATTGCAGTTCTCGTCTGTTGAGGTTATTAACAAGGTTGGAAATGTTGTGGGAACGGCACATCTTATTGGCAGTCACGTTCTTCCACAGCCTGAACAAGTCTGCGAGCCAGAAAAATGCTGCACTTTAAATGAACAGGACGGAGAAAGAGCAATTCTCATTAGAGGAAGCAAAGACTGGGGAATCTGCATCGGAAAATGGGACGGATTCGTCAAAGGTGTTCCTGGTATACCAGGCATAAAAGGTGAACCTGATAAACCAGGTACGAGTGGAACACCAGGAATAAAGGGCCAGCCTGGAAGTCTGTCCATCAAGTTCTTCTCACTCTCTGGAACGCAAGGATGGAAAAGAGTAAAGAAATCTGGAGACCAGTTTTCTATAGCTCTTCTGGGGAAAAGTACCAAGCTTGACGTTAACCTCAGAACGGGAGAGATTTCATTTCCACTAGAGGTGAAAGACGTACCGGAAGCAATTGCACTTGGGTTTGCTGTTGCCATTCTGCACCTTCTTTGTCAACCTCACAACACGGCAGACGAGAGAAACTACATGGTACTATCGGCCGGGAAAACAGCGCAGAGTGACAAACCACGTAGAATTGTCAACGAAGACCTACTGCTTGTTGTGGCGGCTGGTTACTATGCCACCACTGTACCGACTAACTGTTACATGAAGTATAGCGTTGGAGGTGGAGCTTGCGGTGGCTGTGGGGGATGCGGTGGTTGTGGAGGGTGCGGCGGCTGTGGAGGATGTGGAGCGTGCGGTGCATGTGGGGGGTGTGGCAGTTGTGGAGCTTCAAATTTTAAAAGGGGCACCCAACGGATCGTTTTGGTAATCCTCCTTGAGCCGCTTCTCGACGGAAACGATCGCCTGCTCTCAGCCAATCACCACGATGAAGTTCTTTTAGTCAACTGA

Transcript

ANN05480-RA

Protein

Uniprot

Uniprot term	Description
Q9ZQ47	Glycine-rich domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=GRDP1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07173	GRDP-like	Glycine-rich domain-containing protein-like	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009836	Family	Glycine-rich domain-containing protein-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR34365	ENOLASE (DUF1399)	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19949	OTOF; otoferlin	-	Membrane trafficking	ko04131	deepkoala