Detailed information of ANN05576-RA in Leptoseris scabra

Genomic Location: Scaffold_5__1_contigs__length_58733080:33849945...33884225
NR annotation: CAH3014114.1, unnamed protein product [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8C9W3A disintegrin and metalloproteinase with thrombospondin motifs 2 OS=Mus musculus OX=10090 GN=Adamts2 PE=1 SV=2
P79331A disintegrin and metalloproteinase with thrombospondin motifs 2 OS=Bos taurus OX=9913 GN=ADAMTS2 PE=1 SV=1
O95450A disintegrin and metalloproteinase with thrombospondin motifs 2 OS=Homo sapiens OX=9606 GN=ADAMTS2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002069 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00629
all species →
MAMMAM domain, meprin/A5/muDomainInterproscan
PF01562
all species →
Pep_M12B_propepReprolysin family propeptideFamilyInterproscan
PF17771
all species →
ADAMTS_CR_2ADAMTS cysteine-rich domain 2DomainInterproscan
PF19030
all species →
TSP1_ADAMTSThrombospondin type 1 domainDomainInterproscan
PF05986
all species →
ADAMTS_spacer1ADAM-TS Spacer 1DomainInterproscan
PF01847
all species →
VHLVHL beta domainDomainInterproscan
PF01421
all species →
ReprolysinReprolysin (M12B) family zinc metalloprotease DomainInterproscan
PF19236
all species →
ADAMTS_CR_3ADAMTS cysteine-rich domainDomainInterproscan
PF00090
all species →
TSP_1Thrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000998
all species →
DomainMAM domainInterproscan
IPR010909
all species →
DomainPLACInterproscan
IPR002870
all species →
DomainPeptidase M12B, propeptideInterproscan
IPR050439
all species →
FamilyADAMTS and ADAMTS-likeInterproscan
IPR041645
all species →
DomainADAMTS, cysteine-rich domain 2Interproscan
IPR036383
all species →
Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000884
all species →
RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR013320
all species →
Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR036208
all species →
Homologous_superfamilyVHL superfamilyInterproscan
IPR037140
all species →
Homologous_superfamilyvon Hippel-Lindau disease tumour suppressor, beta domain superfamilyInterproscan
IPR010294
all species →
DomainADAMTS/ADAMTS-like, Spacer 1Interproscan
IPR001590
all species →
DomainPeptidase M12B, ADAM/reprolysinInterproscan
IPR024053
all species →
Domainvon Hippel-Lindau disease tumour suppressor, beta domainInterproscan
IPR045371
all species →
DomainADAMTS/ADAMTS-like, cysteine-rich domain 3Interproscan
IPR024079
all species →
Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13723
all species →
ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0004222
all species →
Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508
all species →
Biological ProcessproteolysisInterproscan
GO:0030198
all species →
Biological Processextracellular matrix organizationInterproscan
GO:0031012
all species →
Cellular Componentextracellular matrixInterproscan
GO:0008237
all species →
Molecular Functionmetallopeptidase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN05576-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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