Genomic Location: chr2:100124849...100130062
NR annotation: XP_047125654.1, pre-rRNA-processing protein TSR1 homolog [Hydra vulgaris]
| CDS | ||||
| ANN05667-RA | ||||
| Transcript |
| ANN05667-RA |
| Protein |
| ANN05667-RA |
| Uniprot term | Description |
|---|---|
| Q5SWD9 | Pre-rRNA-processing protein TSR1 homolog OS=Mus musculus OX=10090 GN=Tsr1 PE=1 SV=1 |
| Q2NL82 | Pre-rRNA-processing protein TSR1 homolog OS=Homo sapiens OX=9606 GN=TSR1 PE=1 SV=1 |
| Q5R434 | Pre-rRNA-processing protein TSR1 homolog OS=Pongo abelii OX=9601 GN=TSR1 PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08142 | AARP2CN | AARP2CN (NUC121) domain | Domain | Interproscan |
| PF00231 | ATP-synt | ATP synthase | Domain | Interproscan |
| PF04950 | RIBIOP_C | 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000131 | Family | ATP synthase, F1 complex, gamma subunit | Interproscan |
| IPR012948 | Domain | AARP2CN | Interproscan |
| IPR035968 | Homologous_superfamily | ATP synthase, F1 complex, gamma subunit superfamily | Interproscan |
| IPR039761 | Family | Ribosome biogenesis protein Bms1/Tsr1 | Interproscan |
| IPR007034 | Domain | Ribosome biogenesis protein BMS1/TSR1, C-terminal | Interproscan |
| IPR030387 | Domain | Bms1/Tsr1-type G domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12858 | RIBOSOME BIOGENESIS PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0015986 | Biological Process | proton motive force-driven ATP synthesis | Interproscan |
| GO:0045261 | Cellular Component | proton-transporting ATP synthase complex, catalytic core F(1) | Interproscan |
| GO:0046933 | Molecular Function | proton-transporting ATP synthase activity, rotational mechanism | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0042254 | Biological Process | ribosome biogenesis | Interproscan |
| GO:0000462 | Biological Process | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Interproscan |
| GO:0000479 | Biological Process | endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Interproscan |
| GO:0003924 | Molecular Function | GTPase activity | Interproscan |
| GO:0005525 | Molecular Function | GTP binding | Interproscan |
| GO:0030688 | Cellular Component | preribosome, small subunit precursor | Interproscan |
| GO:0034511 | Molecular Function | U3 snoRNA binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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