Gene detail

Detailed information of ANN05839-RA in Leptoseris scabra

Genomic Location: Scaffold_5__1_contigs__length_58733080:38436310...38440152
NR annotation: CAH3016414.1, unnamed protein product [Porites evermanni]
Species abbreviation LSCAB · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P56597	Nucleoside diphosphate kinase homolog 5 OS=Homo sapiens OX=9606 GN=NME5 PE=1 SV=1
Q6DGQ8	Nucleoside diphosphate kinase homolog 5 OS=Danio rerio OX=7955 GN=nme5 PE=2 SV=2
Q99MH5	Nucleoside diphosphate kinase homolog 5 OS=Mus musculus OX=10090 GN=Nme5 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002247 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05186 all species →	Dpy-30	Dpy-30 motif	Motif	Interproscan
PF00334 all species →	NDK	Nucleoside diphosphate kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001564 all species →	Family	Nucleoside diphosphate kinase	Interproscan
IPR007858 all species →	Conserved_site	Dpy-30 motif	Interproscan
IPR034907 all species →	Domain	Nucleoside diphosphate kinase-like domain	Interproscan
IPR036850 all species →	Homologous_superfamily	Nucleoside diphosphate kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46161 all species →	NUCLEOSIDE DIPHOSPHATE KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004550 all species →	Molecular Function	nucleoside diphosphate kinase activity	Interproscan
GO:0006183 all species →	Biological Process	GTP biosynthetic process	Interproscan
GO:0006228 all species →	Biological Process	UTP biosynthetic process	Interproscan
GO:0006241 all species →	Biological Process	CTP biosynthetic process	Interproscan
GO:0003341 all species →	Biological Process	cilium movement	Interproscan
GO:0005929 all species →	Cellular Component	cilium	Interproscan
GO:1902176 all species →	Biological Process	negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20790	NME5; nucleoside diphosphate kinase homolog 5	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.