Gene detail

Detailed information of ANN05852-RA in Leptoseris scabra

Genomic Location: Scaffold_5__1_contigs__length_58733080:38723308...38730226
NR annotation: CAH3043335.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q8HY12	C-type lectin domain family 4 member M OS=Hylobates lar OX=9580 GN=CLEC4M PE=3 SV=1
Q8MIS5	CD209 antigen-like protein 2 OS=Macaca mulatta OX=9544 GN=CD209L2 PE=1 SV=1
Q28670	Aggrecan core protein OS=Oryctolagus cuniculus OX=9986 GN=ACAN PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00008	EGF	EGF-like domain	Domain	Interproscan
PF00059	Lectin_C	Lectin C-type domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037221	Homologous_superfamily	H-type lectin domain superfamily	Interproscan
IPR001304	Domain	C-type lectin-like	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR018378	Conserved_site	C-type lectin, conserved site	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR050111	Family	C-type lectin and snaclec domain-containing protein	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR014716	Homologous_superfamily	Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22803	MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0038023	Molecular Function	signaling receptor activity	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan